Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0314 ATGGTTACTAGCACCACAAAGTTGTTACTGACAGACATGGTTTTAGGTGTCGACCATGTTCCTTCAAACTACGTTCGACCCCCCTCTGAGCGTCCTAATTTTAAGGATGTCCAGGCGTCAGATGTCTCCATTCCTCTCATAGACCTACAGGACCTCCAGGGTCCTGGCCGCCCTGATGTTGTCAAACAGATTGGCCAAGCCTGCCAACACGATGGTTTCTTCCAGATTAAAAACCATGGGGTGTCCGAGACCATGATCAGTAACATGTTGAGGCTAGCCAGAGACTTTTTCCAGCTTCCAGAAAGCGAGAGGCTCAAGAACTACTCTGACAATCCTTCCAAGACAACCAGGCTCTCCACTAGTTTTAATGTTAAGACAGAAAAGGTAGCCAACTGGAGGGATTTCTTGAGGCTCCATTGTTACCCTCTGGAGGACTATGTCCATGAATGGCCTTCCAATCCTCCAACTTTCAGGGAGGATGTGGCTGAGTATTGCACTAGTACCAGAGAACTAGTACTGAGACTGCTGGAAGCCATTTCTGAGAGCTTAGGCCTTGAGAAAAACTATGTAAAAGGGGTATTAAGCAAGCAGGGGCAGCACATGGCTATGAACTACTATCCACCATGCCCGCAACCAGAGCTGACCTATGGGTTACCTGGACATACTGATCCCAATTTAATCACTGTTCTTCTCCAAGATGATGTGCCTGGGTTGCAGGTCTTAAGGAATGAAAAATGGGTGGCAGTCAATCCTATTCCAAATACCTTCATTATCAACATTGGTGACCAAATGCAGGTAATCAGCAATGATCGATACAAGAGTGTGCTGCATCGAGCTGTGGTGAACTGCAACAAGGACCGGATCTCCATCCCAACGTTCTACTGCCCATCACCAGATGCTGTAATAGGCCCTGCCCCGGAACTAGTCAAGGATGATCGCCCAGCTGTCTATAAGAATTTCACTTACGGGGACTACTACACTCAATTTTGGAACAGGGGGCTTGCAACAGAGTGTTGCTTAGACACGTTCAAAATATCACCCACCTGA 1047 0.4737 MVTSTTKLLLTDMVLGVDHVPSNYVRPPSERPNFKDVQASDVSIPLIDLQDLQGPGRPDVVKQIGQACQHDGFFQIKNHGVSETMISNMLRLARDFFQLPESERLKNYSDNPSKTTRLSTSFNVKTEKVANWRDFLRLHCYPLEDYVHEWPSNPPTFREDVAEYCTSTRELVLRLLEAISESLGLEKNYVKGVLSKQGQHMAMNYYPPCPQPELTYGLPGHTDPNLITVLLQDDVPGLQVLRNEKWVAVNPIPNTFIINIGDQMQVISNDRYKSVLHRAVVNCNKDRISIPTFYCPSPDAVIGPAPELVKDDRPAVYKNFTYGDYYTQFWNRGLATECCLDTFKISPT* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0314 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 44 152 IPR026992 -
Vvi2g0314 348 Gene3D - 5 327 IPR027443 -
Vvi2g0314 348 FunFam Protein DMR6-like oxygenase 2 7 333 - -
Vvi2g0314 348 SUPERFAMILY Clavaminate synthase-like 14 333 - -
Vvi2g0314 348 Pfam 2OG-Fe(II) oxygenase superfamily 199 296 IPR044861 -
Vvi2g0314 348 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 40 325 - -
Vvi2g0314 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 296 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0314 Vvi-Chr2 2525445 2527027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0314 17 345 Glycosyltransferase AT5G59530 32.641 3.06e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0314 K24028 - vvi:100246227 724.546