Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0302 ATGGGGTTGATGCCTGGGAGCAGAGGGCACAAGGCTGCCAATGGCGTCTCCACACGATGGGTTTCCGTCTTCTGCATTGCCAGCTTCTGCTTTGGAGTCCTTGTGATTAACAGGCTTTGGGTCATTCCTGATCCAGTCAAAATTGATGAGGCTTCTTCTATGAAGAAAAATCAATTGGGAGAACTTCAGCCCATTGTTAATTGTGACAAGAAGGACACATCTGTACAGGCGGGAGACATCCTTTCTCAAGTTTCCCAAACCCATGATGTAATAATGACTTTAGACAAAACAATATCCTCTTTGGAGATGCAACTAGCTGCAGCTAGAGCTTCCAAAGGTGATGGTGAGGAAGGATCTCCAATGGTTACAAAACCAGGAACTGAGCAAGTGAAGGAGCGCCAGAAGGTTTTCTTTGTTATGGGGATTATGACTGCATTCAGCAGCAGAAAACGCAGGGACTCAATCAGAGAAACCTGGATGCCTCAAGGAAAGGAGTTAAAGAAGCTGGAGAAAGAGAAGGGAATTATAATACGGTTTGTTATAGGACACAGTGCAACCCCTGGTGGTGTTCTGGATCGCACTATTGATGCCGAGGAAACACAACATAAGGATTTTCTGCGACTGAACCATATAGAAGGATATCACGAGTTATCCTCAAAAACGCAAATATACTTCTCAACGGCTGTTGCTAGGTGGGATGCTGACTTCTATATCAAAGTTGATGATGATGTGCACATCAATCTTGGTATGGTTGGTTCTACTTTGGCCCGCCATAGGTCTAAACCTCGTGTTTACACTGGTTGTATGAAGTCTGGACCTGTCCTGTCAGAGACAGGGGTCAAGTACCATGAACCAGAATACTGGAAATTTGGTGAGGAGGGAAATAAGTATTTTCGGCATGCAACAGGACAAATATATGCTATCTCTAAAGATCTGGCTACCTATATTTCGGTAAACCGCCACATACTGCATAGGTATGCAAATGAAGATGTCTCTCTGGGTTCTTGGTTTATTGGTCTTGATGTTGAGCATATAGATGATCGAAGCTTCTGCTGTGGGTCTCCTCCTGATTGTGAGTGGAAGGCTCAAGCAGGAAATCCCTGTGCTGCATCTTTTGATTGGAGCTGCAGTGGCATTTGCAAATCTGTGGAGAGAATGGAGGAGGTACACCAGCACTGTGGGGAGGGTGATGGAGCGATTTGGCACACGAGTTTTTGA 1218 0.4516 MGLMPGSRGHKAANGVSTRWVSVFCIASFCFGVLVINRLWVIPDPVKIDEASSMKKNQLGELQPIVNCDKKDTSVQAGDILSQVSQTHDVIMTLDKTISSLEMQLAAARASKGDGEEGSPMVTKPGTEQVKERQKVFFVMGIMTAFSSRKRRDSIRETWMPQGKELKKLEKEKGIIIRFVIGHSATPGGVLDRTIDAEETQHKDFLRLNHIEGYHELSSKTQIYFSTAVARWDADFYIKVDDDVHINLGMVGSTLARHRSKPRVYTGCMKSGPVLSETGVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISVNRHILHRYANEDVSLGSWFIGLDVEHIDDRSFCCGSPPDCEWKAQAGNPCAASFDWSCSGICKSVERMEEVHQHCGEGDGAIWHTSF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0302 405 Gene3D - 125 352 - -
Vvi2g0302 405 Pfam Domain of unknown function (DUF4094) 17 111 IPR025298 -
Vvi2g0302 405 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 95 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi2g0302 405 FunFam Hexosyltransferase 130 351 - -
Vvi2g0302 405 Pfam Galactosyltransferase 150 347 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0302 Vvi-Chr2 2441565 2448038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0302 1 405 Glycosyltransferase AT1G32930 75.369 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0302 K20856 - vvi:100253114 830.091