Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0301 ATGATGTTGGTTTCGGTGTTGTTGGAGATCTTACGGAGACCCACAATTGGGGATGTCTTGGCGGAGCTGATGATGTTCATGGCCCCGCTGTGGATTGCGGTTGTTGTTGGAGTTTTGGTGGGATGGACGTGGAAGCCCAAATGGGCGAATTTGGGAAGGGAAATGTTGGATTGTTCTTCTGTCCCCAGCAATTCTTCTCCAGCACCGCCGGCGGCGTCTTCCAGTACGGTTGCCGCGCCTTCATCTGTGTCTGCGTCCATTCCCTGCTTGAATTCGCTAAAGTTGCAATTGCCCAGTTGCATTTCTTGGATTGGCGACGATGGGATAGACAAGTCACTAATGGCGCCAACAGGAGATTCTGATTGCAGTCCATCCCAGCTGAAAGCAGAAAACTCGGTTGTTGTGGCAGAAGATGATTTAGAGCATCTGTGCCAACTTGTAGAGGTGAAAGATGGAGGTCCCGCATGGATTCAGATGATGGATCGCTCTACTCCAACCATGAGCTATAAAGCATGGAGGAGAGATCCTGATACTGGCCCTCCACAATATCGTAGCAGTACTATCTTTGAGGATGCTACTCCTGAGTTGGTGAGGGATTTCTTTTGGGATGATGGCTTTAGATTGAAGTGGGATGACATGCTTATATATGCTGCAACTTTGGAGGAGTGCCCCACCACAGGAACCATGTTAGTTCACTGGGTTCGCAAGTTTCCCTTCTTCTGCAGTGATCGAGAATATATGATAGGTCGCCGAATTTGGGAATCAGGGCGATCATATTACTGTGTTACAAAGGGAGTACCTTGCTCCTCTGTCCCACGGCGCAACAAACCACGGCGTGTTGATTTGTACTATTCTAGCTGGTGCATTCGTGCAGTTGAATCAAAGAGAGGGGATGGCCAGCTGACTGCATGTGAGGTGCTGCTCTTCCATCACGAAGATATGGGTATACCATGGGAAATTGCAAAGCTTGGAGTTCGGCAGGGGATGTGGGGAGCTGTAAAGAAGGTTGACCCTGGTTTACGTGCTTACCAGAAGGAGAGAGGATCCGGAGCTGCACTTTCACGTTATGCTTTCATGGCTCAGATCAACACCAAGGTCAGTGCAGACTACCTGAGATCGCTGGAAAGCACCAACAACGATTCTTCAGAGGTTGAAACATTTGGTTCATCTGAGAAGCCAATGGGTAGAAACATACCAAAGCTTCTAGTTGTTGGTGGGGCTATTGCCCTTGCTTGTAGTCTAGACCGGGGGCTCTTGACAAAGGCAGTCATATTTGGAGTTGCCAGAAGCTTTGCAAGGATTGGAAGGAGGTTGTGA 1317 0.4905 MMLVSVLLEILRRPTIGDVLAELMMFMAPLWIAVVVGVLVGWTWKPKWANLGREMLDCSSVPSNSSPAPPAASSSTVAAPSSVSASIPCLNSLKLQLPSCISWIGDDGIDKSLMAPTGDSDCSPSQLKAENSVVVAEDDLEHLCQLVEVKDGGPAWIQMMDRSTPTMSYKAWRRDPDTGPPQYRSSTIFEDATPELVRDFFWDDGFRLKWDDMLIYAATLEECPTTGTMLVHWVRKFPFFCSDREYMIGRRIWESGRSYYCVTKGVPCSSVPRRNKPRRVDLYYSSWCIRAVESKRGDGQLTACEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKVDPGLRAYQKERGSGAALSRYAFMAQINTKVSADYLRSLESTNNDSSEVETFGSSEKPMGRNIPKLLVVGGAIALACSLDRGLLTKAVIFGVARSFARIGRRL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0301 438 CDD START_STARD2_7-like 133 343 - -
Vvi2g0301 438 SUPERFAMILY Bet v1-like 136 342 - -
Vvi2g0301 438 FunFam StAR-related lipid transfer protein 7, mitochondrial 133 346 - -
Vvi2g0301 438 ProSiteProfiles START domain profile. 154 345 IPR002913 GO:0008289
Vvi2g0301 438 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 39 428 - -
Vvi2g0301 438 Gene3D - 130 347 IPR023393 -
Vvi2g0301 438 Pfam START domain 150 312 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0301 Vvi-Chr2 2435823 2438638 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0301 - - vvi:100247984 856.67