Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0295 ATGGAGTTGAGTAAATTCTGCTACTCTTCTTTAGTTTTTCTCATCTCAGGGATTGTACTGCCGGCGGTGGTGGTTGCTGTCGGCATCAATTACGGCCAGATCGCGAACAATCTGCCTTCGCCGGACGATGTGGTTCCACTGGTACGGTCAATTGGTGCGAGCAGAGTGAAGCTCTACGACGCAGATCCGAAGGTGCTGCGCGCATTTGCCAACACTGGAGTTGAGTTCATTGTTGGGCTGGGAAACGAGTACTTGTCGAAGATGAGAGATCCGGACAAAGCGCTGGCCTGGGTGAAAGCGAACGTTCAGGCGCACTTGCCTGATACCAATATCACCTGCATCACCGTCGGGAACGAGATTTTGACATACAATGACACTTCTCTCAATGATAACCTGCTGCCGGCGATGCAGGGCGTACACGCAGTTCTGGTTAACCTAGGGTTAGACAAGCAAGTCAGTGTCACCACAGCGCACTCGCTCGCCATTCTCGAAACCTCCTATCCGCCATCGGCCGGAGCTTTCCGGCAAGATCTGATAGAGTGCATTACTCCGATTCTGAACTTCAATGTCAAAACCGGATCACCATTTCTCATCAACGCCTACCCATTCTTCGCGTACAAAGCTAATCCGAAGCAAGTCCCCATCGATTTCGTCCTCTTTCAGCCGAACCAAGGGGTTGTCGATCCTGACACGAATCTCCACTATGACAACATGCTGTTCGCACAGATCGACGCCGTTTACTCCGCCCTGGCTTCCCTCGGCTTCAAGAAGATTCCCGTTCAGATCTCCGAAACTGGTTGGCCTTCCAAGGGCGACGAGGATGAGACCGGGGCCACAATTGAGAACGCAAAGAAGTACAACGGAAACCTGATAAAGCTGATGTCTCAGAAGAGAGGAACGCCCATGAGGCCAAACTCTGATTTGAACATTTACGTTTTTGCTCTGTTCAACGAAAACATGAAGCCCGGGCCCACGTCGGAGAGGAACTATGGGCTGTTCAAACCCGATGGAACCCCAGCCTATCCGCTCGGATTCAGCGGAATCGAAGTCAGCAGCAACACAACCACCCCTGGGTACGGCGGAAACGTCAGTGTCACGCAGCCGGCTACTTCTTCCACCGGTTATCTTTCCATTTCATCTGCCACGGAAAGATTAGGTTCCCGTGGCATTCTATCCTGTGTGTGCTTGAGCTGGATTGCACTGGCCCTTAGGAGTTGA 1218 0.5213 MELSKFCYSSLVFLISGIVLPAVVVAVGINYGQIANNLPSPDDVVPLVRSIGASRVKLYDADPKVLRAFANTGVEFIVGLGNEYLSKMRDPDKALAWVKANVQAHLPDTNITCITVGNEILTYNDTSLNDNLLPAMQGVHAVLVNLGLDKQVSVTTAHSLAILETSYPPSAGAFRQDLIECITPILNFNVKTGSPFLINAYPFFAYKANPKQVPIDFVLFQPNQGVVDPDTNLHYDNMLFAQIDAVYSALASLGFKKIPVQISETGWPSKGDEDETGATIENAKKYNGNLIKLMSQKRGTPMRPNSDLNIYVFALFNENMKPGPTSERNYGLFKPDGTPAYPLGFSGIEVSSNTTTPGYGGNVSVTQPATSSTGYLSISSATERLGSRGILSCVCLSWIALALRS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0295 405 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 354 IPR044965 GO:0004553|GO:0005975
Vvi2g0295 405 FunFam Glucan endo-1,3-beta-glucosidase 14 25 351 - -
Vvi2g0295 405 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Vvi2g0295 405 Gene3D Glycosidases 25 351 - -
Vvi2g0295 405 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0295 Vvi-Chr2 2411218 2413057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0295 1 403 Glycoside Hydrolase AT1G32860 62.295 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0295 - - vvi:100254667 811.216