Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0291 ATGAGGAAAGGTGACCATGTAATTCCAATCTTTAATGGGGAGTGTGGGGACTGCGTCTACTGCAAGTGCGACAAAACTAATCTCTGTGAGAGGTTTAGGGTACATCCGCTGAGGAGCGTGATGGTGAACGACGGCAACTGTAGGTTTTCCACCAAAGATGGGAAACCCATCTTCCATTTTCTCAACACTTCAACTTTCACCGAGTACACCGTCCTTCACTCCGCCTGCGTCGTCAAGATCGACTCCAAGGCTCCTCTCAAGAAGATGATCTTGCTCAGCTGTGGCGTCTCTTCTGGGCTTGGAGCTGCATGGAACACTGCCAAGGTGCAAGCAGGGTCGAGTGTGGCGATTTTCGGGCTGGGTTCAGTTGGTCTTGCTGCTGCTGAAGGAGCAAGGACCAGAGGAGCTTCAAAAATAATAGGAGTTGATATCAACCCAAACAAATTTATCAAAGGAAAAGCAATGGGGCTCACTGATTTCATCAACCCAAATGATTCAAAGAACCCTGTGCATGAGATAATCCAGGAAATGACAGGAGGAGGAGTAGACTACAGCTTTGAATGTGCAGGCAATTTGGACGTTCTGAGGGAGGCCTTCTTGTCCACCCATGAGGGATGGGGTATGACAGTTCTTCTGGGAATTCATCCAACTCCGAGGATGCTCCCTATCCATCCTATGGAATTGTTTGATGGTCGGAGGATTATAGGATCAGTGTTCGGAGACTTCAAAGGGAAGACCCAGCTTCCTCATTTTGCCCAACAATGCATGCGCGGGGTCAGTCACTTTCACATACCCTTTTATACATCAGCTAATGGCTAA 819 0.4823 MRKGDHVIPIFNGECGDCVYCKCDKTNLCERFRVHPLRSVMVNDGNCRFSTKDGKPIFHFLNTSTFTEYTVLHSACVVKIDSKAPLKKMILLSCGVSSGLGAAWNTAKVQAGSSVAIFGLGSVGLAAAEGARTRGASKIIGVDINPNKFIKGKAMGLTDFINPNDSKNPVHEIIQEMTGGGVDYSFECAGNLDVLREAFLSTHEGWGMTVLLGIHPTPRMLPIHPMELFDGRRIIGSVFGDFKGKTQLPHFAQQCMRGVSHFHIPFYTSANG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0291 272 Gene3D - 99 237 - -
Vvi2g0291 272 FunFam S-(hydroxymethyl)glutathione dehydrogenase 99 237 - -
Vvi2g0291 272 Pfam Zinc-binding dehydrogenase 123 241 IPR013149 -
Vvi2g0291 272 Pfam Alcohol dehydrogenase GroES-like domain 2 51 IPR013154 -
Vvi2g0291 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 85 258 IPR036291 -
Vvi2g0291 272 Gene3D - 2 259 - -
Vvi2g0291 272 SUPERFAMILY GroES-like 2 110 IPR011032 -
Vvi2g0291 272 PANTHER ALCOHOL DEHYDROGENASE 2 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0291 Vvi-Chr2 2369010 2370772 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0291 K00001 - vvi:100256495 538.495