Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0280 ATGGAGACGTTTGGGATGATGCTTAAGTCTTGTCTGTTGATAATGTTTGTTCTCGTTCTTTCCTTGCAAGTATTGCCCTCTCTTTGTTACACTTCATTTGTGTTTGGAGACTCCTTGGTTGATGCGGGAAACAATGACTATCTCTTTAGCCTCTCAAAGGCTGATTCTCCTCCTTATGGCATCGACTTCACGCCTTCTGGTGGACAACCCACTGGCAGATTCACCAATGGAAGAACCATATCTGATATTCTAGACGAGGCTCTTGGAGCCAAGTCATTTCCTCTGCCTTATCTCGCACCTACCACTAAACCTGAGGCATTTCTCCGAGGACTAAATTATGCGTCTGGGGCTTCAGGAATATTGGATAAAACAGGGAGCTTGTTTATAGGGAGAATTCCACTAAGGGAGCAGGTAGACTCTTTTGAGCAAAGCAGGAGTCATATGGTGAATATGATAGGAGAGAAAGCTACAATGGAATTGTTAAAGAAGGCAATGTTCTCAATAACAACTGGATCAAATGATATGCTCAACTATATCCAACCTTTAATACCATTTTTCGGAGATGACAAGATTTCCGCTACAATGCTTCAAGATTTCATGGTGTCCAACTTGACTATACAGCTTAAGCGACTGCACAAGTTGGGGGCTAGAAAATTCATTGTAGTTGGGGTTGGACCACTTGGATGCATACCATTTGTACGCGCCATCAACTTGTTACCAAGTGGAGAATGTGCGGTCGAGGTGAATGAGATGGTCCGAGGCTACAATAAGAAACTGAACCGGGTGCTGGATCATTTGAACCAAGAGATGGAGCCAGAAACCATCTTTGTATATGCAAATTCCTATGACATAGTCATGGGGATTATACAAAATCATCATGAATATGGATTTGTCAATGCAGGGGATCCATGTTGTGGCGGATATTTGCCTCCATTTATTTGCTTCAAGGGGCCTAATGCAAACACAAGTTCGGTTTTGTGCGATGATCGATCCAAGTATGTGTTTTGGGATGCATACCACCCCACAGAAGCTGCAAATAGAATCATGGCGAGAAAATTACTCAATGGTGATGAAAGCATTAGCTACCCAATCAACATCGGCAACCTTTACAACTACAAACCCTAG 1125 0.4284 METFGMMLKSCLLIMFVLVLSLQVLPSLCYTSFVFGDSLVDAGNNDYLFSLSKADSPPYGIDFTPSGGQPTGRFTNGRTISDILDEALGAKSFPLPYLAPTTKPEAFLRGLNYASGASGILDKTGSLFIGRIPLREQVDSFEQSRSHMVNMIGEKATMELLKKAMFSITTGSNDMLNYIQPLIPFFGDDKISATMLQDFMVSNLTIQLKRLHKLGARKFIVVGVGPLGCIPFVRAINLLPSGECAVEVNEMVRGYNKKLNRVLDHLNQEMEPETIFVYANSYDIVMGIIQNHHEYGFVNAGDPCCGGYLPPFICFKGPNANTSSVLCDDRSKYVFWDAYHPTEAANRIMARKLLNGDESISYPINIGNLYNYKP* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0280 374 Pfam GDSL-like Lipase/Acylhydrolase 33 352 IPR001087 GO:0016788
Vvi2g0280 374 Gene3D SGNH hydrolase 30 358 IPR036514 -
Vvi2g0280 374 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 32 367 - -
Vvi2g0280 374 CDD SGNH_plant_lipase_like 33 357 IPR035669 -
Vvi2g0280 374 SUPERFAMILY SGNH hydrolase 112 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0280 Vvi-Chr2 2305371 2306888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0280 21 369 Acyl Lipid Metabolism Gene Families AT4G10950 35.955 1.02e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0280 - - vvi:100247970 754.977