LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi2g0279	ATGGCTGTGATGGGCAAGACCAGATCGGTTTTAACGTTAACCGGCAGAGTCATTAACGAAGCTGTGAGCTTCATTATCTTTTCTATTTTAGACCTTCTTGATTTCCTTCTTTGTTTTGTTTACAAAGTGGCTGATTTCTTCATTGAGGCTGAGTGGAAGCCTTGTTACTGCTCCTCAGCCAAAGAAGCCATCACCAGCAGTGGCAAGATCTTGGTCTCAGAACAAGGAGAATCTAAGATTGTTTGCCTCAGTTCTAGTAAGCTTCAGCTTGAGGAGATCTCCGACACCCTCTACGCCCGTCCTTCCCTCGTCTCTGAGGTCTCCAAATCCACTGTTAAAGAGCTTAAGAAGCTCAAGATGGAGGGTACCATGATACAATCTTGCGAGAAGATCAAGAAAGGAACTGTTCGATCCACATTTACCGTCAACTCCACCATTGTTGAAATGCTCCAAGGAAGGATTGGAGGGCAACAATCTCATCCCATCCCAAGATGGTCTGATTGTGACTGTAAAACTTGCACTTCTTGGACCTCTTCTACCAAAGAAACCCTCTTTGTTCGAGCTGACGGAGCCAAAGATAAGGCACGAGAAGATGTGCTCTTCATTCATGGATTCATCTCCTCTTCCGCATTCTGGACCGAAACACTTTTCCCAAACTTCTCAAACTCTGTGAAATCAACCTACCGGTTATTTGCAGTGGATCTGCTAGGGTTTGGGAGGAGCCCCAAGCCAACTGACTCTCTCTACACTCTCAGAGAGCATCTGGACATGATTGAGCGGTCAGTACTAGAGCCATACAAAGTTAAGTCCTTCCACATAGTGGCTCACTCTTTAGGCTGCATATTGGCTCTAGCCCTAGCCGTAAAACATCCCGGGTCCGTGAAATCCCTAACCCTACTTGCACCACCATATTTTCCAGTACCCAAGGGCGAACAAGCTGCACAACATGTGCTGAGAATGGTAGCTCCACGGCACGTGTGGCCGGTGATATCCTTTGGTGCGTCTCTAGCTTGCTGGTACGAGCACATCAGCCGGACAATTTGCCTTCTCATATGCAAGAACCACCGCTTGTGGGAATTTCTCGCCAAGCTGGTCACCAGAAACAGGATCAGGACATTCTTGCTTGAAGGATTTTTTTGCCATACTCATAACGCTGCATGGCATACCTTACACAATATTATTTGTGGGGCGGCTGGAAAGATTGATGGATACATGGAAACTGTCCGCGACCACCTAAAATGCGACGTCAATGTGTTCCATGGAAGGGACGATGAACTAATTCCAGTTGAATGCAGCTACAATGTGCAATCGATGATTCCTCGTGCCCGCATTAAGGTTATAGAAAATAAGGATCACATCACAATTGTTGTTGGGAGGCAGAAAGCCTTTGCTAGGGATCTGGAGGAGATTTGGAGGAGGTCAAGTGGCTAA	1431	0.4668	MAVMGKTRSVLTLTGRVINEAVSFIIFSILDLLDFLLCFVYKVADFFIEAEWKPCYCSSAKEAITSSGKILVSEQGESKIVCLSSSKLQLEEISDTLYARPSLVSEVSKSTVKELKKLKMEGTMIQSCEKIKKGTVRSTFTVNSTIVEMLQGRIGGQQSHPIPRWSDCDCKTCTSWTSSTKETLFVRADGAKDKAREDVLFIHGFISSSAFWTETLFPNFSNSVKSTYRLFAVDLLGFGRSPKPTDSLYTLREHLDMIERSVLEPYKVKSFHIVAHSLGCILALALAVKHPGSVKSLTLLAPPYFPVPKGEQAAQHVLRMVAPRHVWPVISFGASLACWYEHISRTICLLICKNHRLWEFLAKLVTRNRIRTFLLEGFFCHTHNAAWHTLHNIICGAAGKIDGYMETVRDHLKCDVNVFHGRDDELIPVECSYNVQSMIPRARIKVIENKDHITIVVGRQKAFARDLEEIWRRSSG*	477

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi2g0279	476	PRINTS	Alpha/beta hydrolase fold signature	227	242	IPR000073	-
	Vvi2g0279	476	PRINTS	Alpha/beta hydrolase fold signature	273	286	IPR000073	-
	Vvi2g0279	476	PRINTS	Alpha/beta hydrolase fold signature	287	300	IPR000073	-
	Vvi2g0279	476	SUPERFAMILY	alpha/beta-Hydrolases	183	469	IPR029058	-
	Vvi2g0279	476	PANTHER	HYDROLASE	127	467	-	-
	Vvi2g0279	476	Gene3D	alpha/beta hydrolase	171	474	IPR029058	-
	Vvi2g0279	476	Pfam	alpha/beta hydrolase fold	199	304	IPR000073	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi2g0279	Vvi-Chr2	2293763	2296287	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi2g0279	15	475	Acyl Lipid Metabolism Gene Families	AT1G64670	59.831	0.0	587

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi2g0279	-		-	vvi:100251279	935.25