Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0273 ATGGCTACGAGCGTTGTTCACGCGGGAAAGAAGAGAAAGGGGGCGGACGATGAAGATCATTTAGTGGCCAAGAAATCAGCATCGTTGCCAGCGGTGGCGAAGGGGGAAGATCCGATGGCAGCATTGGCGATGGCGCGGCACGAGTTCGGCGAACACGGGGGCGTGAATATGTCGATCGAAGCGTCGGCGACGTTCACGGTGATGGAACCGGACACCATGCGGCGGATGTTCTCCGGTGAGCTGGGTCCGGACCGCGATTTCTTCATCTACAGCCGTCACTTCAACCCCACCGTGCTAAACCTCAGCCGCCAGATGGCGGCGCTGGAGGGCACCGAGGCGGCGTACTGCACTTCCAGCGGGATGTCGGCGATCTCGGCGGCGCTGTTGCAGCTCTGCAGCAGCGGCGACCACATCGTGGCGTCGCGGACTCTGTACGGCGGCACCCACGCCCTCCTCACCCACTTCTTCCCAAGAACCTGCAACATTACGACGTCTTTTGTGGACATCAAAGATCTCGATATGGTGGACGGGGCCATAATCGAAGGAAGAACCAAGGTTTTGTACTTCGAGGCCATTGCCAATCCCGTTCTTTCCGTCGCTAACGTGCCTGAACTCTGCCGTGTGGCACACGATAAGGGCCTAACAGTGGTCGTCGACAACACCTTCGCTCCGATGGTTATGTCGCCGGCGAAACTCGGAGCCGATGTTGTCGTTCATAGTATTTCCAAATTTATCAGCGGCGGAGCCGACATCATCGCAGGTGCTGTGTGTGGGCCTGCAAAGCTGGTGAACTCCATGATGGACCTCCATCAAGGTGCCCTAATGCTGTTGGGCCCAACTATGAACCCCAAGGTGGCATTCGAACTATCAGAGAGAATCCCCCACCTGGGCCTCCGCATGAAAGAGCACTGCCGCAGGGCCCTGGAGTACGCCACGAGGATGAAGAAACTAGGCCTCAAAGTCATCTACCCAGGCCTGGAAGGCCACCCAGACCACACCGTCCTCAAATCTATTGCCAACCTCGACTACGGCTTTGGTGGGCTCCTCTGCTTGGACATGGGCACGGAAGAGAAGGCGAACCGCTTGATGAACCTCTTGCAGAACTCCACCCAGTTCGGGTTCATGGCTGTGAGCTTGGGCTACTACGAGACCCTCATGTCTTGCTCCGGGAGTAGCACCAGCAGTGAGATGAACGCTGAGGAGAAGGCTCTGGCTGGGATTTCACCTGGGTTGGTGAGGATGTCAGTTGGGTATAGCGGGACTTTGGAGCAGAGATGGAGCCAGTTCGAGAAGGCACTGTCGAGAATGCAGGGATGA 1317 0.5756 MATSVVHAGKKRKGADDEDHLVAKKSASLPAVAKGEDPMAALAMARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFFIYSRHFNPTVLNLSRQMAALEGTEAAYCTSSGMSAISAALLQLCSSGDHIVASRTLYGGTHALLTHFFPRTCNITTSFVDIKDLDMVDGAIIEGRTKVLYFEAIANPVLSVANVPELCRVAHDKGLTVVVDNTFAPMVMSPAKLGADVVVHSISKFISGGADIIAGAVCGPAKLVNSMMDLHQGALMLLGPTMNPKVAFELSERIPHLGLRMKEHCRRALEYATRMKKLGLKVIYPGLEGHPDHTVLKSIANLDYGFGGLLCLDMGTEEKANRLMNLLQNSTQFGFMAVSLGYYETLMSCSGSSTSSEMNAEEKALAGISPGLVRMSVGYSGTLEQRWSQFEKALSRMQG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0273 438 Pfam Cys/Met metabolism PLP-dependent enzyme 51 418 IPR000277 GO:0019346|GO:0030170
Vvi2g0273 438 MobiDBLite consensus disorder prediction 1 20 - -
Vvi2g0273 438 SUPERFAMILY PLP-dependent transferases 49 424 IPR015424 -
Vvi2g0273 438 Gene3D - 40 293 IPR015421 GO:0003824
Vvi2g0273 438 FunFam Cystathionine gamma-lyase 37 294 - -
Vvi2g0273 438 PIRSF CGS 27 437 IPR000277 GO:0019346|GO:0030170
Vvi2g0273 438 Gene3D Aspartate Aminotransferase, domain 1 297 437 IPR015422 GO:0003824
Vvi2g0273 438 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 41 436 IPR000277 GO:0019346|GO:0030170
Vvi2g0273 438 FunFam Putative methionine gamma-lyase 297 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0273 Vvi-Chr2 2223199 2224951 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0273 K01761 - vvi:100253026 858.596