Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0272 ATGCTTGATGGTGGTCAACGGCGGTACGATCCGTCGCTGGAGGTGCTTGGAGGAGGTCTGGATTCATACCTCCCGGCATTCAAAACCCTGAACCGTCCGTATGACGCGTTTCCTGTGGTTGGATGGAATCGGCACGTGGAGACGATCTTCGCATCGTTTTTCCGGTCTGTTCCTGACGTCAGATTGCGGCGGGAGTGTCTGAGGACGAAGGACGACGGCGCTGTCGCTCTCGATTGGGTTTCCGGTGACGACCGTCGGCTTGGAGCCGACTCCCCGGTTCTCATTCTACTGCCAGGTCTAACAGGAGGGAGTGAAGATAGTTATGTGAGGCATTTGCTGGTCAGAGCAAGAAGCAATGGAATGCGAGTAGTTGTGTTCAATAGCCGTGGCTGTGCAGATAGCCCCGTGACCACGGCTCAGTTCTATTCAGCTTCATTTACAGAAGATTTGCGTCAAGTAGTGGCACATGTTTCAAATCGCTACCCAAATGCAAATTTATATGCTGTTGGTTGGTCTCTTGGGGCTAATATTCTTGTTCGGTATTTGGGCCAGGAATCCCATGCTTGTCCTCTGTCTGGTGCTGTGTCTTTGTGTAATCCTTTCAATTTGGTTATAGCAGATGAGGACTTCCGTAAAGGTTTTAACATTGTTTATGACAAAACTCTTGCAAATGCTCTCCGCAAAATTTTCAAGAAGCATATACTCATTTTTGAAGATATAGGAGGTGAATTTAATATTCCATTGGCTGCCAATGCCAAATCTGTTAGGGAGTTTGATGATGGATTAACTCGAGTTTCATTTGGATTCAAGTCAGTGGATGACTACTACTCTAATTCAAGCAGTTCAGATTCCATAAAACATGTGTGCACACCTTTGCTTTGCATCCAGGCTGCAAATGATCCAATTGCTCCATCCAGGGGAATTCCTCGTGAAGACATCAAGGAAAACCCAAACTGTTTGTTGATAGTTACACCTAAAGGCGGCCACCTAGGGTGGGTTTCAGGGCCTGAAGCTCCCCGTGGAGCTCCTTGGACTGATCCTGTAGTGATGGACTTCCTCGAGCATCTGGAGAGAGGAAGACCCAAAGTTATTGCATCTTCTAGTGAATCAGATACAGTCCAGCTCTGTACAGAAGGCTTGCGCCACCTGAAGTGTGGGTAA 1161 0.4772 MLDGGQRRYDPSLEVLGGGLDSYLPAFKTLNRPYDAFPVVGWNRHVETIFASFFRSVPDVRLRRECLRTKDDGAVALDWVSGDDRRLGADSPVLILLPGLTGGSEDSYVRHLLVRARSNGMRVVVFNSRGCADSPVTTAQFYSASFTEDLRQVVAHVSNRYPNANLYAVGWSLGANILVRYLGQESHACPLSGAVSLCNPFNLVIADEDFRKGFNIVYDKTLANALRKIFKKHILIFEDIGGEFNIPLAANAKSVREFDDGLTRVSFGFKSVDDYYSNSSSSDSIKHVCTPLLCIQAANDPIAPSRGIPREDIKENPNCLLIVTPKGGHLGWVSGPEAPRGAPWTDPVVMDFLEHLERGRPKVIASSSESDTVQLCTEGLRHLKCG* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0272 386 PIRSF Ab_hydro_YheT 12 374 IPR012020 -
Vvi2g0272 386 Pfam alpha/beta hydrolase fold 92 330 IPR000073 -
Vvi2g0272 386 Gene3D alpha/beta hydrolase 77 354 IPR029058 -
Vvi2g0272 386 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 21 366 - -
Vvi2g0272 386 SUPERFAMILY alpha/beta-Hydrolases 56 340 IPR029058 -
Vvi2g0272 386 ProSitePatterns Uncharacterized protein family UPF0017 signature. 259 300 IPR000952 -
Vvi2g0272 386 FunFam Esterase/lipase/thioesterase family protein 68 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0272 Vvi-Chr2 2206447 2212006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0272 60 323 Miscellaneous Gene Families AT2G03140 35.581 6.68e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0272 - - vvi:100249542 777.704