Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0271 ATGGCCAGCACTATCAGATCGCAGGAGGACCAGCGCGCAGGAGCAGAGATTGTGTACGGCTCTGAAGCGTGCTTCAACCACTCCATATCACTCCTGGAGGAGCTGGGATTCCCCAAGGGCGTTCTCCCCCTGCAAGACCTCGTAGAGTGTGGCCGAGTGCGAGAAACTGGGTTCGTGTGGATGAAACAGAAGGCGCCGTACGAGCACTTCTTCACTGGGACCAACACCCGGGTGAGCTACTCCATGGAAGTGACTGCGTACGTGGAGAAGTTCAAAATGAAGAAGATGACAGGCATCAAGAGCAAGCAGGTTTTCTTGTGGGTCCCGATAACGGAGATGAGCATTGACGATCCTGCGTCTCAGAAAATTCACTTCAAGACTCCGGTGGGAATCGGGAAGGCCTTTCCCCTCGTGGCATTCATGACGGAAGAAGAGAAACAGAAATATCTGGAGGAAGCTCGGAAATAA 468 0.5321 MASTIRSQEDQRAGAEIVYGSEACFNHSISLLEELGFPKGVLPLQDLVECGRVRETGFVWMKQKAPYEHFFTGTNTRVSYSMEVTAYVEKFKMKKMTGIKSKQVFLWVPITEMSIDDPASQKIHFKTPVGIGKAFPLVAFMTEEEKQKYLEEARK* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0271 155 Gene3D - 10 150 IPR036758 -
Vvi2g0271 155 PANTHER T31J12.3 PROTEIN-RELATED 25 143 IPR007493 -
Vvi2g0271 155 Pfam Protein of unknown function, DUF538 30 140 IPR007493 -
Vvi2g0271 155 SUPERFAMILY At5g01610-like 6 146 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0271 Vvi-Chr2 2205554 2206021 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0271 - - vvi:100242761 314.694