Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0256 ATGTGGGTTCTCGGGACGGTCTCGTGCGTGCTCCTCTCGTTTCTGAACCAGTTCTTCTGGTACAGAACAGAGCCGCTCACCATCACTGCAATCTCAGCTCAGATCGCCGTGGTGCCTCTCGGCCGACTCATGGCTGCCAAAATCACCGACCGGGTCTTCTTCAAGGGAACCCCCTGGGAATTCACCCTAAATCCCGGGCCTTTCAACGTCAAAGAGCACGTTCTCATCACCATCTTCGCCAACTCCGGCGCCGGAACTGTCTACGCCATTCATGTGGTCACAGTAGTTAAGGTCTTCTATAAAAAGCACATCAGCTTCTTCGTTTCGTTGATCGTTGTTATAACAACCCAGGTTCTGGGGTTCGGATGGGCGGGGATATTCCGGCGGTACCTGGTAGAACCGGCAGCCATGTGGTGGCCGGCGAATCTTGTCCAAGTTTCCTTATTCAGGGCTCTGCATGAGAAAGAAGAAAGGCCAAAGGGTGGTGTGACTCGAACTCAGTTTTTCCTAATCGCCTTCATCTGCAGCTTTGCCTATTATGTTTTCCCTGGCTACATGTTTGAAATGCTAACTTCACTCTCATGGATATGCTGGATTTTCCCCACTTCAGTTCTTGCCCAACAGCTTGGCTCAGGCCTTTACGGGCTTGGAATTGCTGCAGTGGGGCTTGACTGGTCCACCATTTCCGCCTACCTTGGAAGCCCCCTTGCAAGCCCTTGGTTCGCCACAGCCAATGTGGCTGTTGGCTTCGTCTTTGTCATGTATGTTCTGACTCCCATCTGCTATTGGCTCAATGTCTACAAAGCCAAAACCTTCCCCATCTTCTCCGATGATCTCTTCACATCCACAGGCCAAGAGTACAATATCTCCTCCATAATCACCAGCAACTTTCACCTTAATATCACAGCTTATGAGGAAGAGGGGCCTCTTTACCTCAGCACATTTTTCGCTATGACATATGGTGTAGGCTTTGCTGCACTTTCTGCCACTGCTGTCCATGTGCTGCTTTTCCATGGAAGAGAAATATGGGAGCAAAGCAAATCGAGTTTTAAGGACAAGGGAATGGACATACACACGAGGCTCATGACCAGGTATAAACAAGTCCCGGAGTGGTGGTTTTGGAGCATCCTCATTGCAAACATTGCGTTCACCATCTTTGCCTGCCAGTATTACAATGACCAGCTTCAATTGCCATGGTGGGGTGTCTTACTAGCTTGTGCCATAGCCATTGTATTCACTCTTCCCATTGGAATCATTACCGCTATCACAAATCAGACTCCAGGCTTGAACATCATCACTGAGTATATAATTGGGTATATCTACCCAGGATATCCTGTTGCCAACATGTGCTTCAAAGTGTACGGATACATTAGTATGACACAGGCAGTCACCTTCCTGCAAGACTTCAAGCTTGGCCACTACATGAAGATTCCTCCAAGAACAATGTTCATGGCACAGGTGGTGGGAACCCTCATAGCTGGTTTTGTGTACTTAGGCACCGCCTGGTGGATGATGGAGACCATCCCTGACATCTGTGAGACGACAGCCTCCAGCAGCCCCTGGACTTGCCCAAGCGATCGGGTATTCTACGATGCTTCTGTCATCTGGGGTCTGATCGGCCCTCGCAGAATTTTTGGAGACGAGGGTGTTTATGAGGCGGTCAACTGGTTCTTCCTAGCTGGAGCTGTCGCCCCTGTCCTTGTCTGGTTAGCCCATAAGGCCTTCCCCAAACAAGAATGGATTGGACTCATCAATATGCCGGTCCTGATAAGCTCCACAGGAATGATGCCACCAGCTACTGCAGTTAACTACACTACTTGGGTCATTGCAGGCTTCCTCTCCGGCTTTGTTGTGTATAGGTACCGCCCAGACTGGTGGCAGCGCCACAACTATGTCCTCTCTGGGGCGCTTGATGCTGGCCTCGCCTTCATGGGGGTGCTTCTGTATCTGTGCTTGGGCTTGGAAGACATCAGCGTTGACTGGTGGGGAAATGACCTTGATGGATGTCCCTATGCTACCTGCCCAACAGCCAAAGGAGTTTTCGTCGAAGGCTGCCCAGTTTTTGACTAA 2070 0.5034 MWVLGTVSCVLLSFLNQFFWYRTEPLTITAISAQIAVVPLGRLMAAKITDRVFFKGTPWEFTLNPGPFNVKEHVLITIFANSGAGTVYAIHVVTVVKVFYKKHISFFVSLIVVITTQVLGFGWAGIFRRYLVEPAAMWWPANLVQVSLFRALHEKEERPKGGVTRTQFFLIAFICSFAYYVFPGYMFEMLTSLSWICWIFPTSVLAQQLGSGLYGLGIAAVGLDWSTISAYLGSPLASPWFATANVAVGFVFVMYVLTPICYWLNVYKAKTFPIFSDDLFTSTGQEYNISSIITSNFHLNITAYEEEGPLYLSTFFAMTYGVGFAALSATAVHVLLFHGREIWEQSKSSFKDKGMDIHTRLMTRYKQVPEWWFWSILIANIAFTIFACQYYNDQLQLPWWGVLLACAIAIVFTLPIGIITAITNQTPGLNIITEYIIGYIYPGYPVANMCFKVYGYISMTQAVTFLQDFKLGHYMKIPPRTMFMAQVVGTLIAGFVYLGTAWWMMETIPDICETTASSSPWTCPSDRVFYDASVIWGLIGPRRIFGDEGVYEAVNWFFLAGAVAPVLVWLAHKAFPKQEWIGLINMPVLISSTGMMPPATAVNYTTWVIAGFLSGFVVYRYRPDWWQRHNYVLSGALDAGLAFMGVLLYLCLGLEDISVDWWGNDLDGCPYATCPTAKGVFVEGCPVFD* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0256 689 NCBIfam small oligopeptide transporter, OPT family 1 657 IPR004648 GO:0055085
Vvi2g0256 689 NCBIfam OPT family oligopeptide transporter 1 654 IPR004813 GO:0035673
Vvi2g0256 689 PANTHER ISP4 LIKE PROTEIN 1 687 IPR004648 GO:0055085
Vvi2g0256 689 Pfam OPT oligopeptide transporter protein 1 651 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0256 Vvi-Chr2 2105118 2108787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0256 1 688 Organic Solute Cotransporters AT4G27730 65.706 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0256 - - vvi:100251260 1423.3