Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0254 ATGGGGGAGGTTGTTGGGCCAAGATTGTATAGTTGCTGTAATTGCCGAAACCATGTTGCTCTTCATGATGATGTTATTTCTAAAGCATTTCAGGGAAGACATGGCCGGGCCTTCCTGTTCTCTCATGCGATGAATGTTAATGTTGGGCCCAAAGAGGACAGGCACCTCATGACTGGTCTCCACACTGTTGCGGATGTTTTCTGTTGTGACTGCTGTCAGGTGCTGGGTTGGAAGTATGAACGTGCTTATGAAGAATCACAGAAATACAAGGAAGGGAAGTTCATACTTGAGAAGTCCAAAATTGTCAAGGAAAACTGGTAA 321 0.4486 MGEVVGPRLYSCCNCRNHVALHDDVISKAFQGRHGRAFLFSHAMNVNVGPKEDRHLMTGLHTVADVFCCDCCQVLGWKYERAYEESQKYKEGKFILEKSKIVKENW* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0254 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Vvi2g0254 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 102 IPR004910 -
Vvi2g0254 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 8 103 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0254 Vvi-Chr2 2100886 2102056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0254 - - vvi:100241103 232.646