Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0250 ATGGCAGACACAATCATTACCTCTGAGAATCCATCCCTTTCGTCGCCATTGAATCCCTCAAACCGCATAATCTGCCGAGTGTGTCAAAAGCAGTTTTCACAGTACACTTGCCCTAGATGCAATTCCCGGTATTGTTCACTTCAGTGTTACAAGTCTCATAGTCTTCGATGCACAGAATCCTTCATGCGAGAAAATGTAGTGGAGGAGCTGGGGCAGATGCAACCAGATGATGAAACCAAACATAAAATGTTGGACATACTCAAACGGTTCCATTCAGAAGAGGACATGGATAGCATGGATGAGGATGATTCAGGTCTGTCTGAGGAGACGATTCAGAAAATTTTATCAGGATGTCAAGTCAGCTTTGACGATTTATCTCCCAATGAAAAGAGACTATTCCAAAGAGCTGTGGCATCTGGAGAACTGAGCAAGATGATTGAACCCTGGGTTCCATGGTGGTTGAAGCCTGCTGCTAGAACGCTATCTCTCAGCCAGGAAGGAACTCAACTTGTCCAACCACTCATCAAGCAAGAAACATCAGTATCATCGGAAGATGACCCAGAAAGTAATCAAGCAAATGAGATCCCTCCTGGCCCTGAAACCCCATTTCCCCCTGTTAGCAAGCTTATTGCCACAGAGCCATCCCCGCTTTTAACTGTTCACCTGGTTGACATTCTATACAGCTACTGTTTCACCCTCCGCATCTACAATGGAGATTGGCGATCAGATGCATTAGGATCAGCCATGGTGTTATTGAGCATATCATCTGTCTTGGGTCAAGCTGGGCTGCCTGAAACCATATTGGAAGCTGTGTCTCATTGCTTGGAGCAGACATGCTCTCCTGCTTACAGACACCTTGGTGGCCTGCAATTTGGACTGGGACTCCTCGATGATGTGATAACTCTACTCTCCCTTGGGAGCCCTGCTCTAGTCTGCTCCCTTTGTGATCTGCAGAGGCTGATCCAGGCTGGGGAAAGGGAGCTGAAGCTAGGAAAGCCGAGAAAGTCGAAAAGGCCAGATATAAGAAGTAAGCTGAAGCTTGCAGAGAGGAAGATATACTTCATTATGTGCTGGGTCCATGAGCAGCCAGATGAAGCCTGGTCTTCCTTGGCAGCCATTGTAAAGACCGAGAAGGGTTCAACAATGGACTTTGCAGCCAGTCAAAGGTCTGTCAAAATGGAAGATAAATCAAAATCCAGAGGCAAGATTCTCATCGAGGAGGTTCAATGA 1230 0.4667 MADTIITSENPSLSSPLNPSNRIICRVCQKQFSQYTCPRCNSRYCSLQCYKSHSLRCTESFMRENVVEELGQMQPDDETKHKMLDILKRFHSEEDMDSMDEDDSGLSEETIQKILSGCQVSFDDLSPNEKRLFQRAVASGELSKMIEPWVPWWLKPAARTLSLSQEGTQLVQPLIKQETSVSSEDDPESNQANEIPPGPETPFPPVSKLIATEPSPLLTVHLVDILYSYCFTLRIYNGDWRSDALGSAMVLLSISSVLGQAGLPETILEAVSHCLEQTCSPAYRHLGGLQFGLGLLDDVITLLSLGSPALVCSLCDLQRLIQAGERELKLGKPRKSKRPDIRSKLKLAERKIYFIMCWVHEQPDEAWSSLAAIVKTEKGSTMDFAASQRSVKMEDKSKSRGKILIEEVQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0250 409 Pfam HIT zinc finger 22 51 IPR007529 -
Vvi2g0250 409 Gene3D - 14 66 - -
Vvi2g0250 409 PANTHER ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED 6 408 IPR039646 -
Vvi2g0250 409 SUPERFAMILY HIT/MYND zinc finger-like 21 59 - -
Vvi2g0250 409 MobiDBLite consensus disorder prediction 177 206 - -
Vvi2g0250 409 Pfam SHQ1 protein 212 324 IPR007009 -
Vvi2g0250 409 ProSiteProfiles Zinc finger HIT-type profile. 25 57 IPR007529 -
Vvi2g0250 409 MobiDBLite consensus disorder prediction 177 196 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0250 - - vvi:100258139 780.785