Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0249 ATGACACGAAAAATGGCTCATCAAAAGGAAGCCACCAACAGGGTAGAGTGGAAGATACGGGTGGCTGATGGTTCATCAAAAGATTTGGTACCTGAGTCAGGGCCTGCAGGCAGAGCCTGGCTTGGCATACAAGGACTGATTGCAGGGTTGGTTTTGAAAGTGGGGAGATGCTTCAAGAAAGCTTGGGATTTAGCTGTAGATGACCCCAGGAAAGTGATCCATTGTCTGAAGGTAGGGACAGCTCTCACAGTTGTATCACTCTTTTACTATACGAGGCCTTTGTATGAAGGACTTGGAAGAAATGCTATGTGGGGAGTCATGACTGCGGTGGTCGTCTTTGAAAATACTGTTGGTGCAACACTATCTAAAAGCCTCAACAGAGCATGTGGGACTCTTCTTGCTGGATCTCTTGCTGTTGGTGTTCACTGGATTGCTAGTCAATCAGGAGAAAAACTTGAGCCCTTCGTGAATGGAGCCTCAGTTTTCCTACTAGCTTCTGCAGCAACCTTCTCCAGGTTCATTCCAACAGTGAGAACCCGGTTTGATTATGGTGCTCTGGTCTTCATTCTCACCTTCAGCTTGATCTCCATTTCCGGGTATCGTGTCGAGAAACTGTTGAAGATGGCCCATCAAAGATTGTCCACCATCGCCATTGGGGGTTTCATGTGCATTCTCATAAGCATACTGGTTTGCCCTATTTGGGCAGGCAAGGAGCTCCATCTTCTCATCACTAGAAACATGGACAAACTTGCCTACTCCTTGGATGGTTGTGTAGCAGAGTACTTCAACAATAGTGGGATCCCTGTGGAGAAATCACAAGGCTACAAGTGTGTGCTAAACTCAAAGGCAGCAGAGGAAACCATGGCCAATTTTGCTAGATGGGAGCCTGCCCATGGCCATTTCAAGTTCAAGCATCCATGGAGACAGTATCTCAAGGTTGGGGCATCAATGAGAAGATGTGCATACTGCATAGAGGCTCTCAATGGCTGCATCAATTCAGAAAATCAGGTTCCCGAGTCCATAAAGCAGCATCTCAGTGGTAACTGCTTGAGATTAGGCTCAGTCTCTTCAAGTGTAATAAGAGAGCTGGCAATCACCATGAGAACAATGAAGAAATCACCAAGGACACAGAACTTATTGAAAGAGATGAAGAATTCAGTCCAAGAGCTCCACAATGAATTGGGATCTCTACCTAATTTACTACTTCCACCACCTTCAATAGAGGCAACACTTCCTCTAGAGGAGGTGATTCCAATTGCAACTGTAGCCTCTCTACTGATTGAAGTTGCTGCAAGAATTGAAGGCATTGTAAGTGCCACTGAAGAACTAGCAAGTCTGGCAAAATTCAAGCCTGCAGTTGAAAGGATTGCACCCCATTAA 1380 0.458 MTRKMAHQKEATNRVEWKIRVADGSSKDLVPESGPAGRAWLGIQGLIAGLVLKVGRCFKKAWDLAVDDPRKVIHCLKVGTALTVVSLFYYTRPLYEGLGRNAMWGVMTAVVVFENTVGATLSKSLNRACGTLLAGSLAVGVHWIASQSGEKLEPFVNGASVFLLASAATFSRFIPTVRTRFDYGALVFILTFSLISISGYRVEKLLKMAHQRLSTIAIGGFMCILISILVCPIWAGKELHLLITRNMDKLAYSLDGCVAEYFNNSGIPVEKSQGYKCVLNSKAAEETMANFARWEPAHGHFKFKHPWRQYLKVGASMRRCAYCIEALNGCINSENQVPESIKQHLSGNCLRLGSVSSSVIRELAITMRTMKKSPRTQNLLKEMKNSVQELHNELGSLPNLLLPPPSIEATLPLEEVIPIATVASLLIEVAARIEGIVSATEELASLAKFKPAVERIAPH* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0249 459 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 53 451 - -
Vvi2g0249 459 Pfam Aluminium activated malate transporter 62 444 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0249 Vvi-Chr2 2072743 2075212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0249 5 450 Miscellaneous Gene Families AT4G00910 51.812 6.77e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0249 - - vvi:100253009 885.56