Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0237 ATGGAATTAAACACAAGCCCAACAAATTTTGAGCCCCACAGCCCAGTAGAAGCCTCGACGCCGTCTAGAATACAGGCCCATACTCAAGTCCCAAGGCCCAACTCCCTAGACCCAAAGGCCAAGATCAACTGCGAAGCTCGCAATGTAAAACCCTCGCTAAAACCCCCCAAAAACACGCAGCAACCGCCTGAAAAACTACCGAAAGGCACCTCAATCGCGCCGGAAATGGCTGCTCTGGTGCCAGAAACTGCCCAAAGAATCTTCACCCCCGAAGCCCTCCGCTCCGCCGCCAAGCAATCAGAGCGCTGCCACATCGTCCCCGTCCGGCTTCGCAGAGCCATCAAAAAATTCCTCCGAGAACAGGAGGAGCCCCACATGAAGAGGAAGGTGCTGAGGCTGTCAGAGTCGTTCTGCGAAATCAAGGATGTGAATCTACTGCTCACAGCCTCCACTTCTAGGGAGCTGGTTGAAGATCCTCTCAAGTCCATGGAACGGTCCAAGCGGTGGAAGATCAAGAGTGCGTACGGTGACATTGGGCTCAAGTACAGAGACGATGAGACCGTCGCTTATGTCGCTTCTCGAATGCCCGCTGTTTACTCGGCGTGTTATAGAGTTCTTAGTGAGGTTCGGAGAAGATTACCTGGGTTTTCTCCAGCTGGGGTATTGGATTTTGGTTCTGGAACTGGTTCGGCACTGTGGGCATTGCGGGAGGTCTGGCCACGGACTTTGGAAAGAATTAATTTAGTTGAGCCATCAAAATCGATGCAACGTGTGAGTCAGAGCCTTATACAAGATCAGAAGAACCTGCCTCTTATACATAGCTATGACAGCATTCAAGCTCTAACTCAGAATATCAGTAAGTCCGAGAGAGAGCATGACCTTGTAATTGCTTCCTATGTGCTTGGAGAGATTCCTTCCCTGAAGGACAGAATTACAATAGTGCGCCAGCTTTGGGATCTTACACGGGATGTTCTGGTTTTGGTTGAACCTGGAACACCTCAAGGATCTAATATCATATCTCAAATGCGATCTCATATTTTATGGATGGAAAAAAGGAGAAGTCGCAAAAATGAAGATGCATCAGATGAAGTTTCTAAGGATAAGATGGCTCTCAAAGGTGGTGCATATATAGTTGCTCCTTGTCCTCATGATGGACCTTGTCCACTGGAGAAAACTGGAAAATATTGTCATTTTGTTCAGCGCTTGCAGAGGACGACATCACAGCGAGCATACAAGCGTTCCAAGGGCGAGCCTTTACGTGGTTTTGAAGATGAGAAATTTTGCTTTGTTGCTTTCAAGCGAGGACAACGACCACGGGAACCTTGGCCACTTGATGGTATGAAATTTGATACTTTGAAAGAGCAGCATGCAAAAAGAAATCCAGAAGACCTTGAAATTGACTTTGAGGACCAATTTCAGTTGGAAGATGAGGATATCCCATATCAGGAAGATCCTGTTTCCTATGATTCTGATGTTATAGAAACAGCTGCCATTGATGATGACAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGGAGATGAAGAAACAACAAATGCTGATCTTGGTAGCGGTTGGGGCAGGATCATCTTCACACCTGTCCGGAGGGGCAAGCAGGTTGCAATGGACGTCTGCAGAGCAACCAACCGTGAAGGATCTGAGGGCTCATTTGATCGTGTGGTCATTACGCAGAGTAAAAATCCCACATTACATCGACAAGCTAGAAGATCTCTCTGGGGGGATTTGTGGCCCTTCTAA 1758 0.475 MELNTSPTNFEPHSPVEASTPSRIQAHTQVPRPNSLDPKAKINCEARNVKPSLKPPKNTQQPPEKLPKGTSIAPEMAALVPETAQRIFTPEALRSAAKQSERCHIVPVRLRRAIKKFLREQEEPHMKRKVLRLSESFCEIKDVNLLLTASTSRELVEDPLKSMERSKRWKIKSAYGDIGLKYRDDETVAYVASRMPAVYSACYRVLSEVRRRLPGFSPAGVLDFGSGTGSALWALREVWPRTLERINLVEPSKSMQRVSQSLIQDQKNLPLIHSYDSIQALTQNISKSEREHDLVIASYVLGEIPSLKDRITIVRQLWDLTRDVLVLVEPGTPQGSNIISQMRSHILWMEKRRSRKNEDASDEVSKDKMALKGGAYIVAPCPHDGPCPLEKTGKYCHFVQRLQRTTSQRAYKRSKGEPLRGFEDEKFCFVAFKRGQRPREPWPLDGMKFDTLKEQHAKRNPEDLEIDFEDQFQLEDEDIPYQEDPVSYDSDVIETAAIDDDNEEEEEEEEEEGDEETTNADLGSGWGRIIFTPVRRGKQVAMDVCRATNREGSEGSFDRVVITQSKNPTLHRQARRSLWGDLWPF* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0237 585 MobiDBLite consensus disorder prediction 1 69 - -
Vvi2g0237 585 MobiDBLite consensus disorder prediction 497 524 - -
Vvi2g0237 585 PANTHER 37S RIBOSOMAL PROTEIN S22 96 585 - -
Vvi2g0237 585 Gene3D Vaccinia Virus protein VP39 196 370 IPR029063 -
Vvi2g0237 585 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 197 350 IPR029063 -
Vvi2g0237 585 MobiDBLite consensus disorder prediction 1 32 - -
Vvi2g0237 585 Pfam Mitochondrial small ribosomal subunit Rsm22 372 584 IPR015324 GO:0006412|GO:0008168
Vvi2g0237 585 Pfam Mitochondrial small ribosomal subunit Rsm22 186 349 IPR015324 GO:0006412|GO:0008168
Vvi2g0237 585 MobiDBLite consensus disorder prediction 497 518 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0237 - - vvi:100251375 1000.73