Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0214 ATGGCAGGCAGCCAACGCCCTCCTCTTCACACCCAGCTGCTTATGCCCCGGGCCGGCATAAACCGAGCATTCGCACTTCTCTACTCTTGCGCCATCTTAGCTCTACTCTATCACCATTTCATTGATCTACTCCAGTCCACCTCCATGGTCCCCATCTTCCTTCTTCTGGCTGATTCAATCCTAGCTTTTATGTGGGTGACCGCACAGGCTTTTCGCATGTATCCAACCCATCGTCAGGTTTTCATCGAACACCTTGAGCATTACGTCAAGGAGAGTGATTATCCGGGGCTGGATGTGTTTATATGCACTGCTGATCCATACAAGGAGCCACCTATGGGTGTGGTGAACACAGCTCTTTCTGTGATGGCATATGATTATCCGATAGAGAAGTTGTCGGTGTATGTATCGGATGATGGAGGTTCCAAGTTCACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCCGCCCACTGGCTGCCTTATTGCAGGAAGAACAAGGTTGTGGAGAGGTGTCCAAAGGCACATTTTGGATCCTCCAACCCCTCCAGGTTCCCAGAGACCGATCAGATTAAGACGATGTATGAGAGCATGAGAGTGAGGGTGGAGAATGTGATAAAGAGAGGGAGCATCAGCCATGATTATATCACCAAGCAAGGAGAAAGTGAAGCTCTCAGCAGATGGACAGATGGATTCACTCCTCAGAACCATCCTCCAGTAGTTCAGGTACTATTAGAATATGGCAAAGACAACGATGCCACTGGCCATGGGATGCCAAACCTTGTGTACATCTCCAGAGAGAAAAACACAGATTCTCCCCACAATTTCAAGGCTGGTGCCCTTAACGTCCTGCTCCGAGTATCAGCCATCATGACAAATGCACCAGTGATCCTAACCCTGGATAGCGACATGTACTCCAACGATCCACAAACGCCTCTGCGGGCGCTGTGCTACCTTTTAGATCCTTCCATGGATCCAAAACTAGGGTACATTCAGTTTCCTCAGGTTTTCCATGGGATCAACAAGAATGATATCTATGGTGGTGAAATGAGGCATTCGTTTGAAGTTCATATGCCTGGAATGGATGGGCTAGCCGGCCCCTTTCATGCAGGTTCTGGAGGTTTTTTCCGGCGAAGAGTCTTCTATGGTTGCCCATCTGAAACCCCAGAAATGAACCAGGGTCGGCAGGTTAGCCATTCAATCAAGTCCAGAGAGGTTTTGGCAATGGCACACCATGTCGCAGGCTGCAAGTATGAGAACCAAACCAAATGGGGCAGAAAGATGGGCTTTAGGTATGGCACTTTGGTTGAGGACTTGTACACAAGCTGTCTGATGCAATGTGAAGGATGGAAGTCCATTTATTGTAATCCTAAAAGGCCTGCATTTCTAGGGGAGTCACCCATCAACCTCCATGATTTTCTGAATCAAACCATGAGATGGTCAGTTGGCCTTCTTGAAGTTGCCTTCTCCAGATATAGCCCAATCACCTTTGGAGTCCGATCAATAAGCCTCCTTTCAGGGCTATGTTTTGCTCATTATACCTTCTGGGCCATTTGGGGGATTCCGTTCACCATCTATGCCTTTCTCCCCCAGCTAGCTCTGCTCAATTCTGCCTCAATATTCCCAAAGATATCAGATCCTTGGTTTTTGTTATATGTGGTTCTTTTCCTTGGAGCCTATGGACAAGACTATCTTGAGTTTCTATTATCCGGCAGGCCGACACAGAGGTGGTGGAACCACCAGAGGGCGTGGATTATGAGGGGACTATCGAGTTTCACGTTCGGGTTGGTTGAGTACTTGCTGAAGTATGTTGGCATTTCCACATTTGGGTTTAATGTGACGAGCAAGGTGGTTGAAGAAGAACAAAGCAAGCGATACCAGAAGGGGATCTTCGAGTTTGGAGTCCCATCCCCGATTTTCTTGCCGCTAACCACAGCAGCTATAATCAACTTGGTCGCATTCCTATCCGGCTTCGCAAAAGCCTGCAGGCAAAGAAGCCTAGAAGATGTGTTTCTTCAAATGTTCTTGGCTGGTTTTGCAGTGGTGAACTGCTGGCCAGTATATGAAGCCATGGCCTGGAGGAGAGACCAAGGGAAATTGCCTCTGAAAATCACTGTGATTTCTGTAGTTCTAGCATGGGCTCTCTACTCAGCATCCTCTATGGCATTTTGA 2169 0.4799 MAGSQRPPLHTQLLMPRAGINRAFALLYSCAILALLYHHFIDLLQSTSMVPIFLLLADSILAFMWVTAQAFRMYPTHRQVFIEHLEHYVKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPIEKLSVYVSDDGGSKFTLFAFMEAARFAAHWLPYCRKNKVVERCPKAHFGSSNPSRFPETDQIKTMYESMRVRVENVIKRGSISHDYITKQGESEALSRWTDGFTPQNHPPVVQVLLEYGKDNDATGHGMPNLVYISREKNTDSPHNFKAGALNVLLRVSAIMTNAPVILTLDSDMYSNDPQTPLRALCYLLDPSMDPKLGYIQFPQVFHGINKNDIYGGEMRHSFEVHMPGMDGLAGPFHAGSGGFFRRRVFYGCPSETPEMNQGRQVSHSIKSREVLAMAHHVAGCKYENQTKWGRKMGFRYGTLVEDLYTSCLMQCEGWKSIYCNPKRPAFLGESPINLHDFLNQTMRWSVGLLEVAFSRYSPITFGVRSISLLSGLCFAHYTFWAIWGIPFTIYAFLPQLALLNSASIFPKISDPWFLLYVVLFLGAYGQDYLEFLLSGRPTQRWWNHQRAWIMRGLSSFTFGLVEYLLKYVGISTFGFNVTSKVVEEEQSKRYQKGIFEFGVPSPIFLPLTTAAIINLVAFLSGFAKACRQRSLEDVFLQMFLAGFAVVNCWPVYEAMAWRRDQGKLPLKITVISVVLAWALYSASSMAF* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0214 722 FunFam Cellulose synthase-like protein G3 224 382 - -
Vvi2g0214 722 SUPERFAMILY Nucleotide-diphospho-sugar transferases 237 552 IPR029044 -
Vvi2g0214 722 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 8 706 - -
Vvi2g0214 722 Pfam Cellulose synthase 97 395 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0214 722 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 386 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0214 Vvi-Chr2 1809135 1812271 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0214 9 699 Glycosyltransferase AT4G24010 52.217 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0214 - - vvi:100261528 1489.55