Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0212 ATGGGAGGTGAGGGGGCGACTGAGAGGAAGAGCACCGCCAGCCATGGTCTTCCTCTTCTTCACACAAGGGCGCTCATGCGTCGGACCCCAGCAAACCGAGTATTCGCAGTTGTATACTTGTGTGTCATCTTGGCTCTGCTATATCACCATTTCATCGCTCTACTCCATTCCACCTCCATACTCTCCCTCCTCATTCTTCTAGCTGACGCAGTGCTGGCTTTCATGTGGGTAACTTCTCTGGCTTTTCGCATGTGTCCCACAGAACGTCAGGTTTTCATCGAACACCTTGAGCATTATGCCAAGGAGAGTGAGTACCCTGCTTTGGATGTGTTTATATGCACTGCTGATCCATTTAAGGAGCCACCGATTGATGTGGTGAACACTGCCCTGTCTGTGATGGCTTATGATTATCCAATAGAGAAGCTGTCGGTATACGTGTCGGATGACGGAGGTTCCCAGCTGACTCTCTTTGCTTTCATGGAGGCTGCAAGGTTTGCCACCCACTGGCTACCCTACTGTAAGATAAACAAGATAGTAGAGAGGTGCCCCGAGGCGTATTTTGCATCCAACCCCTCATGGTTCCCTGAGACCGATCAGATTAAGTCGATGTACGAGAGGATGAGAGATAGAGTGGAGAATGTGGTCAAGAGAGGAAGCATTAGCAACGATTATATCCCTGATCAAAGAGAAATCGAAGCTTTCAGCAGATGGACTGATGAATTTACACCTCAGAATCATCCTCCTGTGATTCAGGTTTTACTAGAGCGTGGCAAAGATAAGGACATCACTGGCCATGACATGCCAAACCTCGTATACATCTCTAGAGAGAAAAGAATGGATTCCCCACATCACTTCAAGGCCGGTGCCCTTAACGTCCTACTTCGAGTATCAGCCACCATGACAAACGCACCAGTGATCTTGACCCTAGATGGCGACATGTACTCCAATGATCCACAGACACCTCTTCGCGTGCTGTGCTATCTTTTAGACCCTTCAATGGATCCAAAACTTGGGTATGTTCAGTTTCCGCAGATCTTCCATGGGATCAATAAGAGTGATATCTATGATGGTGAACTAAGGCATGTGTATCAAGTTCAATTGTCCGGAATGGATGGATTGGCAGGCCCTCAACTTGTAGGTTCTGGAAGTTTTTTCCGGCGAAAAATCTTCTTTGGTGGCCCATCAGAAACCCCAGAAATGAACCAGGATCAACTGACGAGCAAGTCGATCAGGTCCAAAGAAGTTTTAGCAATGGCTCACCATGTTGCAGGCTGCAATTTTGGGAACCAAACCAAATGGGGCACCAAGATGGGCTTTAGGTATGGTTCTTTGGTTGAGGACTTGCACACGAGCTATCAGCTGCAATGTGAGGGATGGAAATCCATTAACTGCAAACCTAAAAGGCCTGCATTTCTGGGAAATTCACCCCTCAACCTCCATGACTCGCTGAATCAAACTACGCGTTGGTCGGTTGGCCTCCTTGAAGTAGTCTTCTGCAAACATAACCCCATCATCTATGGAGTCCGGTTCATAAACCTTCTGTCAGGGTTAGGTTTTGCTTATTATGCCTTCTGGCCTTTTTGGTCGGTTCCCCTTACTATCTATGCCTTTCTCCCCCAGCTGGCTCTGCTCAATTCCACCTCAATCTTCCCAAAGGCATGTCTCAGATCCTTGGTTTTTCGTCAATGTATTCCTTTTCCTTGGAGCCTATGGACAAGATTATCTGGAGTTCATATTATCTGGGGGGACAACACTAAGGTGGTGGAACAATCAGAGAATGTGGATGATGAGAGGACTCTCAAGTTTCCCATTTGGGTGGATTGA 1824 0.4737 MGGEGATERKSTASHGLPLLHTRALMRRTPANRVFAVVYLCVILALLYHHFIALLHSTSILSLLILLADAVLAFMWVTSLAFRMCPTERQVFIEHLEHYAKESEYPALDVFICTADPFKEPPIDVVNTALSVMAYDYPIEKLSVYVSDDGGSQLTLFAFMEAARFATHWLPYCKINKIVERCPEAYFASNPSWFPETDQIKSMYERMRDRVENVVKRGSISNDYIPDQREIEAFSRWTDEFTPQNHPPVIQVLLERGKDKDITGHDMPNLVYISREKRMDSPHHFKAGALNVLLRVSATMTNAPVILTLDGDMYSNDPQTPLRVLCYLLDPSMDPKLGYVQFPQIFHGINKSDIYDGELRHVYQVQLSGMDGLAGPQLVGSGSFFRRKIFFGGPSETPEMNQDQLTSKSIRSKEVLAMAHHVAGCNFGNQTKWGTKMGFRYGSLVEDLHTSYQLQCEGWKSINCKPKRPAFLGNSPLNLHDSLNQTTRWSVGLLEVVFCKHNPIIYGVRFINLLSGLGFAYYAFWPFWSVPLTIYAFLPQLALLNSTSIFPKACLRSLVFRQCIPFPWSLWTRLSGVHIIWGDNTKVVEQSENVDDERTLKFPIWVD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0212 607 SUPERFAMILY Nucleotide-diphospho-sugar transferases 118 528 IPR029044 -
Vvi2g0212 607 FunFam Cellulose synthase-like protein G3 234 392 - -
Vvi2g0212 607 Pfam Cellulose synthase 406 554 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0212 607 Pfam Cellulose synthase 108 402 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0212 607 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 245 467 IPR029044 -
Vvi2g0212 607 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 25 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0212 Vvi-Chr2 1797974 1801415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0212 7 553 Glycosyltransferase AT4G24010 51.351 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0212 - - vvi:100246145 1116.68