Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0211 ATGGAAGAGACAAGAGCGAAAGGCCTTCCTCTTCACACAAGGGTGCTCATGCCCCGGACCTGGGCGAACCGAGTCTTTGCATGTGTATACTTGTGTGCCATCTTAGCTCTGCTATATCACCATCTCATTGCTGTGCTGCACTCCACCTCCATGGTCCCCCTCTTCATTCTTCTAGCTGATGCAGTGCTGGCTTTCATGTGGGCAACTTCACAGGCCTTCCGCATGTGTCCAACTGAGCGTCGGGTTTTCATCGAACACCTTCAACATTATGTCAAGCAGAGTGATTATCCAGGGTTGGATGTCTTTATATGCACTGCCGATCCATACAAGGAGCCACCTATGTGTGTGGTGAACACAGCTTTATCGGTAATGGCTTATGATTATCCCCCGGAGAAGCTGTCAGTGTATGTCTCTGATGATGGAGGTTCTCAGCTGACTCTCTTTGCCTTCATAGAGGCTGCTAGGTTTGCCACCCACTGGTTACCCTATTGTAGAAAGAATAAGATTTTAGAAAGGTGTCCCGAGGCCTATTTTAGATCCAGTCCCTCATGGTCTCCTGAGACCGCTCAAATTAAGATGATGTATGAGAGAATGAGAGCTAGGGTGGAGAATGTGGTCAAGAGGGGGAGCATTTTGCCTGATTATATCACAAATGAAGCAGAATCTGAAGCCTTCAGCAGATGGGCTGATGGATTTACGCCTCGAGATCATCCTGCTGTTGTTCAGGTTTTGTTAGAGGCCGACAGAGATAAAGACATAACCGGCCTTACAATGCCCAACCTTGTCTATGCGTCCAGAGAGAAAAACATGAATTTGCCCCATCATTTCAAGGCCGGTGCTCTTAATGTCCTGCTTCGAGTATCAGCAACCATGACCAATGCACCAATACTCCTGACCCTAGACAGCGACATGTACTCAAATGATTCGCAAACGCCTCTTTGTGCACTGTGTTTTCTCTTAGACCCTTGTATAGATTCAAAACTCGGATTTGTTCAGTTCCCTCAGATGTTCTATGGGATCAACAAGAATGATACTTATGGTGCTGAATCTAGACAGAGTGAAATTGTTCTAATTGGGATGGATGGATTGGTAGGGCCTACATATATAGGTACAGGATGTTTTTTCCGCAGACAGGTCTTCCTTGGTGGCTCCTCCCCACAACTGAACCCTGATCTTCTAGTTAGCAAGTCAATCAAGTCCGAAGAAGTTTTAGCACTAGCACACCATGTTGCGGGCTGCAATTATGAAAATCAAACCAGTTGGGGCTCCAAGATGGGATTTAGGTATGGATCATTGGTTGAGGACTTATACACAGGCTATCGACTTCATTGTGAAGGATGGAAGTCCATTTTCTGCAATCCCAAAAGGCCTGCATTTCTGGGAAAGGCGCCTATCAATCTCAATGACATGTTGAATCAAACCGTAAGATGGTGTGTGGGACTCCTTGAAGTGGCATTTTGCGAGCATAGCCCTATCACCTTTGGAGCCCGTTCCATAAACCTTCTCACAGGATTATGTTATGGGCACATGGCATTATGGCCTATTTCGTCCATTCCAGTTACCATCTATGCCTTTCTACCTCAGCTAGCTCTCCTCAAGTGTGTCTCAATCTTCCCAGAGGCCTCAGACCCTTGGTTATTCTTGCGTCTATTTCTTTTCCTTGGAGCCTATGGACAAAATTGTCTCGAGTTTATGTTGTCTGGAGGATCAATCCAAAGGTGGTGGAATGATCAGAGGGTGTGGATGATGAGAGGGCTCTCAAGCATGATGTTTGGATTGGTGGAATACTTACTGAAGACCATTGGCATTTCCACATTTGGATTTAGTGTCACAAACAAGACTGTTGGAGAGGAACAAAGCAAGCGATACGACCAAGGGCTGTTCGAGTTTGGAGTCTCATCACCCTTGTTATTGCCAATGACAACAGCCGCCATAATCAACTGCATCTCTTTCCTATGGGGCATTGCCCAAGTCTTCACACAAGGAAGGCTTGAAGGTATACTTCTACAGATGTTCTTAGCAGGTTTTGCGACGGTAAATTGCTGGCCAATATATGAAGCCATTCTGATGAGGACCGACGGAGGAAAGATCCCAGTGAAGCTCACATTGATCTCAATTATTCTAGCATGGGCTCTTTACTTAACATCTTCGATAGCATTCTAA 2163 0.4582 MEETRAKGLPLHTRVLMPRTWANRVFACVYLCAILALLYHHLIAVLHSTSMVPLFILLADAVLAFMWATSQAFRMCPTERRVFIEHLQHYVKQSDYPGLDVFICTADPYKEPPMCVVNTALSVMAYDYPPEKLSVYVSDDGGSQLTLFAFIEAARFATHWLPYCRKNKILERCPEAYFRSSPSWSPETAQIKMMYERMRARVENVVKRGSILPDYITNEAESEAFSRWADGFTPRDHPAVVQVLLEADRDKDITGLTMPNLVYASREKNMNLPHHFKAGALNVLLRVSATMTNAPILLTLDSDMYSNDSQTPLCALCFLLDPCIDSKLGFVQFPQMFYGINKNDTYGAESRQSEIVLIGMDGLVGPTYIGTGCFFRRQVFLGGSSPQLNPDLLVSKSIKSEEVLALAHHVAGCNYENQTSWGSKMGFRYGSLVEDLYTGYRLHCEGWKSIFCNPKRPAFLGKAPINLNDMLNQTVRWCVGLLEVAFCEHSPITFGARSINLLTGLCYGHMALWPISSIPVTIYAFLPQLALLKCVSIFPEASDPWLFLRLFLFLGAYGQNCLEFMLSGGSIQRWWNDQRVWMMRGLSSMMFGLVEYLLKTIGISTFGFSVTNKTVGEEQSKRYDQGLFEFGVSSPLLLPMTTAAIINCISFLWGIAQVFTQGRLEGILLQMFLAGFATVNCWPIYEAILMRTDGGKIPVKLTLISIILAWALYLTSSIAF* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0211 720 FunFam Cellulose synthase-like protein G3 225 382 - -
Vvi2g0211 720 SUPERFAMILY Nucleotide-diphospho-sugar transferases 101 487 IPR029044 -
Vvi2g0211 720 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 175 IPR029044 -
Vvi2g0211 720 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 385 IPR029044 -
Vvi2g0211 720 Pfam Cellulose synthase 394 713 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0211 720 Pfam Cellulose synthase 99 388 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0211 720 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 703 - -
Vvi2g0211 720 FunFam Cellulose synthase isolog 87 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0211 Vvi-Chr2 1794323 1797246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0211 1 705 Glycosyltransferase AT4G24010 52.150 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0211 - - vvi:100241038 1463.36