Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0209 ATGGGAGGAGGAAGCCTAACCGATCAGAGCCAATTCCTTCCTCTTCACACACGGGCGCTACTGCATCACACCAGCGCAAACCGAGTATTTGCAGTTGTCTACTTGTGTGCCATCTTAGCTCTGCTGTATCATCACTTCCTTGCTCTACTTCACACCACCACCGTAGTCTCCCTCCTCTTTCTTCTAGCTGATGCAGTGCTGGCTTTCATGTGGGCAACCGCACAGGCCTTTCGGATGTGTCCAACCCGACGTCAGGTTTTCATCGAACACCTTCAACATGTTGCCAAGGAGAGTGATTATCCGGCACTGGATGTGTTTATCTGCACTGCTGATCCATACAAGGAGCCACCTATAAGTGTGGTGAACACTGCTCTATCTGTGATGGCGTATGATTATCCAACAGAGAAATTGTCAGTATATGTATCAGATGATGGAGGTTCGCAGCTGACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCAACCCACTGGCTACCTTACTGCAGGAAGAACAAGATTTTAGAGAGGTGTCCAGAGGCCTATTTTGAATCAAACCCCTCATCGTGGTTCCCTGAGGCTGATCAAATTAAGCTGATGTACGAGAAAATGAGAGTTAGGGTGGAGACTGCGGTTAAGAGTGGGATAATTAGCCATGATTATATGAATAGCAAGCAGGAATTGGAGGCTTTCAGCAGATGGACTGATGGATTTACATCTCAGAATCATCCTGCAGTGATTCAGGTTTTGTTGGAGTGTGGTAAAGATGAGGATGTCATGGGCCATACGATGCCCAACCTTGTTTATGTATCCAGAGGGAAAGGCATCAATTTGCCCCACAATTTCAAGGCCGGTGCTCTTAATGCCCTGCTTCGTGTATCAGCCACCATGACTAATGCACCAGTAATCCTGACCCTAGATAGCGACATGTACTCCAATGATCCACAGACACCTCTTCGTGCGCTGTGTTATCTCTTAGACCCCTCTATGGATCCAAAACTTGCGTATGTTCAGTTTCCTCAGATCTTCTATGGGATCAACAAGAATGATATTTATGGTGGTGAAGCCAGGCATACATTTCAAATTCATCCCACGGGAATGGATGGACTGAAAGGCCCTATATATCTAGGTACAGGAGGTTTTTTCCGGCGAAAAGTCTTCTTTGGGGACCCATCAGAAACCTCTGAATTGAAGCAGGATCACCTAGGGAGCAAGTCAATCAAGTCCAGGGTAATTTTAGCATCGGCGCATCATGTTGCAGACTGCAATTTTGAGAGCCAGAGCCAGAGCCAGAGCCAATGGGGCACCAAGATGGGCTTTAGGTATGGATCACTGGTTGAGGACATGTACACTAGCTATATGCTTCAATGTGAGGGATGGAAGTCCATTTTTTGCCATCCCAAAAGGCCTGCATTTCTGGGAAATTCACCCACCAACTTCCATGACTTTCTGAATCAAACCAGGCGATGGTCAATTGGCCTCCTTGAAGTGGCCTTCTGCAAATATAGCCCAATCACATATGGCACCCGCACCATAAACCTTCTCAGTGGCCTATGTTTTGCTTACTATTCCTTCTGGCCCATTTGGTCAATTCCCATTACGATCTATGCCTTTCTCCCCCAGCTTGCTCTGCTTAACTATGTCTCGATCTTCCCAAAGATGTCAGATCCCTGGTTTTTTGTGTATATATTCTGTTTTCTTGGAACCTATGGGCAAGATTATCTCGAGTTAATATTATCTGGGGGGACAACTCAAAGGTGGTGGAACAATCAGAGAGTATGGATGATGAGGGGGCTCTCGAGTTTCTCAATTGGGTCGGTTGAATACATCCTCAAGTCCATTGGCATTTCCACATTCGGATTCAATGTGACAAGCAAGGCGGTGGAAGAGGAACAAAGCAAGCGATACAAGAAAGGGATGTTTGAGTTTGGAGTCGCATCACCCTTGTTCTTGCCACTAACAACAGCAGCAATAATCAACTTGGTCTCATTCCTATGGGGCATTGCACAAATCTTCAGGCAAGGAAGAATTGAAGATCTACTTCTGCAGATTTTGTTAGTTGGTTTTGCAATGGTGAACTGTTGGCCCATATATGAAGCCATGGTGTTGAGGGCTGATGAAGCAAAGATGCCAGTGAAGATCACATTGATCTCAATTGTCCTAGCATGGGCTCTTTACTTGGCATCTTCCATAGCATTTTAA 2199 0.4598 MGGGSLTDQSQFLPLHTRALLHHTSANRVFAVVYLCAILALLYHHFLALLHTTTVVSLLFLLADAVLAFMWATAQAFRMCPTRRQVFIEHLQHVAKESDYPALDVFICTADPYKEPPISVVNTALSVMAYDYPTEKLSVYVSDDGGSQLTLFAFMEAARFATHWLPYCRKNKILERCPEAYFESNPSSWFPEADQIKLMYEKMRVRVETAVKSGIISHDYMNSKQELEAFSRWTDGFTSQNHPAVIQVLLECGKDEDVMGHTMPNLVYVSRGKGINLPHNFKAGALNALLRVSATMTNAPVILTLDSDMYSNDPQTPLRALCYLLDPSMDPKLAYVQFPQIFYGINKNDIYGGEARHTFQIHPTGMDGLKGPIYLGTGGFFRRKVFFGDPSETSELKQDHLGSKSIKSRVILASAHHVADCNFESQSQSQSQWGTKMGFRYGSLVEDMYTSYMLQCEGWKSIFCHPKRPAFLGNSPTNFHDFLNQTRRWSIGLLEVAFCKYSPITYGTRTINLLSGLCFAYYSFWPIWSIPITIYAFLPQLALLNYVSIFPKMSDPWFFVYIFCFLGTYGQDYLELILSGGTTQRWWNNQRVWMMRGLSSFSIGSVEYILKSIGISTFGFNVTSKAVEEEQSKRYKKGMFEFGVASPLFLPLTTAAIINLVSFLWGIAQIFRQGRIEDLLLQILLVGFAMVNCWPIYEAMVLRADEAKMPVKITLISIVLAWALYLASSIAF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0209 732 FunFam Cellulose synthase-like protein G3 230 388 - -
Vvi2g0209 732 Pfam Cellulose synthase 103 399 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0209 732 Pfam Cellulose synthase 404 725 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0209 732 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 225 388 IPR029044 -
Vvi2g0209 732 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 178 IPR029044 -
Vvi2g0209 732 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 570 IPR029044 -
Vvi2g0209 732 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 14 715 - -
Vvi2g0209 732 FunFam Cellulose synthase isolog 91 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0209 Vvi-Chr2 1788240 1791694 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0209 15 717 Glycosyltransferase AT4G24010 52.321 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0209 - - vvi:100258169 1478.38