Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0208 ATGGTCCCCATCTTCCTTCTTCTGGCTGATTCAATCCTAGCTTTCATGTGGGTGACCGCACAGGCCTTTCGCATGTATCCAACCCATCGTCAGGTTTTCATCGAACACCTTGAGCATTACGTCAAGGAGAGTGATTATCCGGGGCTGGATGTGTTTATATGCACTGCTGATCCATACAAGGAGCCACCTATGGGTGTGGTGAACACAGCTCTTTCTGTGATGGCATATGATTATCCGATAGAGAAGTTGTCGGTATATGTATCGGATGATGGAGGTTCCAAGTTCACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCCGCCCACTGGCTGCCTTATTGCAGGAAGAACAAGGTTGTGGAGAGGTGTCCAAAGGCACATTTTGGATCCTCCAACCCCTCCAGGTTCCCAGAGACCGATCAGATTAAGACGATGTATGAGAGCATGAGAGTGAGGGTGGAGAATGTGATAAAGAGAGGGAGCATCAGCCATGATTATATCACCAAGCAAGGAGAAAGTGAAGCTCTCAGCAGCTGGACAGATGGATTCACTCCTCAGAACCATCCTCCAGTAGTTCAGGTACTGTTAGAATATGGCAAAGACAACGATGCCACTGGCCATGGGATGCCAAACCTTGTGTACATCTCCAGAGAGAAAAGCACAGATTCTCCCCACAATTTCAAGGCTGGTGCCCTTAACGTCCTGCTCCGAGTATCAGCCACCATGACAAATGCACCAGTGATCCTAACCCTGGATAGCGACATGTACTCCAACGATCCACAAACGCCTCTGCGGGCGCTGTGCTACCTTTTAGATCCTTCCATGGATCCAAAACTAGGGTACATTCAGTTTCCTCAGGTTTTCCATGGGATCAACAAGAATGATATCTATGGTGGTGAAATGAGGCATGTGTTTGAAGTTCATATGCCTGGAATGGATGGGCTAGCCGGCCCCATACATGCAGGTTCTGGAGGTTTTTTCCGGCGAAGAGTCTTCTATGGTTGCCCATCTGAAACCCCAGAAATGAACCAGGGTCGGCAGGTTAGCCATTCAATCAAGTCTAGAGAGGTTTTGGCAATGGCACACCATGTCGCAGGCTGCAAGTATGAGAACCAAACCAAATGGGGCAGAAAGATGGGCTTTAGGTATGGCACTTTGGTTGAGGACTTGTACACAAGCTGTCTGCTGCAATGTGAAGGATGGAAGTCCATTTATTGTAATCCTAAAAGGCCTGCATTTCTAGGGAAGTCACCCATCAACCTCCATGATTTTCTGAATCAAACCATGAGATGGTCAGTTGGCCTTCTTGAAGTTGCCTTCTCCAGATATAGCCCAATCACCTTTGGAGTCCAATCGATAAGCCTCCTTTCAGGGTTATGTTTTGCCCATTATACCTTCTGGGCGATTTGGGCGATTCCAGTCACCATCTATGCCTTTCTCCCCCAGCTAGCTCTGCTCAATTCTGCCTCAATATTCCCAAAGATATCAGATCCTTGGTGTTGGTTATATGTGGTTCTTTTCCTTGGAGCCTATGGACAAGACTATCTTGAGTTTGTATTATCCGGCGGGCCGACAAAAAGGTGGTGGAACCATCAGAGGGCGTGGATGATGAGGGGACTGTCGAGTTTCACGTTCGGATTGGTTGAGTACTTGCTGAAGTATATTGGCATATCCACATTTGGGTTTAATGTGACGAGCAAGGTGGTTGAAGAAGAACAAAGCAAGCGATACCAGCAGGGGATCTTCGAGTTTGGAGTCCCATCCCCGGTTTTCTTGCCGCTAACCACAGCAGCAATAATCAACTTGGTCGCATTCCTATCCGGCATTGCTCAAGCCGGCAGGCAAAGAAGCATAGAAGATGTGTTTCTTCAACTGTTCTTGGCTGGTTTTGCAGTGGTGAACTGCTGGCCAGTATATGAAGCCATGGCCTGGAGGAGAGACCAAGGAAAATTGCCTCTGAAAATCACTGTGATTTCTGTAGTTCTAGCATGGGCTCTTTACTCAACATCCTCTATGGCATTTTGA 2025 0.477 MVPIFLLLADSILAFMWVTAQAFRMYPTHRQVFIEHLEHYVKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPIEKLSVYVSDDGGSKFTLFAFMEAARFAAHWLPYCRKNKVVERCPKAHFGSSNPSRFPETDQIKTMYESMRVRVENVIKRGSISHDYITKQGESEALSSWTDGFTPQNHPPVVQVLLEYGKDNDATGHGMPNLVYISREKSTDSPHNFKAGALNVLLRVSATMTNAPVILTLDSDMYSNDPQTPLRALCYLLDPSMDPKLGYIQFPQVFHGINKNDIYGGEMRHVFEVHMPGMDGLAGPIHAGSGGFFRRRVFYGCPSETPEMNQGRQVSHSIKSREVLAMAHHVAGCKYENQTKWGRKMGFRYGTLVEDLYTSCLLQCEGWKSIYCNPKRPAFLGKSPINLHDFLNQTMRWSVGLLEVAFSRYSPITFGVQSISLLSGLCFAHYTFWAIWAIPVTIYAFLPQLALLNSASIFPKISDPWCWLYVVLFLGAYGQDYLEFVLSGGPTKRWWNHQRAWMMRGLSSFTFGLVEYLLKYIGISTFGFNVTSKVVEEEQSKRYQQGIFEFGVPSPVFLPLTTAAIINLVAFLSGIAQAGRQRSIEDVFLQLFLAGFAVVNCWPVYEAMAWRRDQGKLPLKITVISVVLAWALYSTSSMAF* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0208 674 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 185 338 IPR029044 -
Vvi2g0208 674 FunFam Cellulose synthase-like protein G3 176 334 - -
Vvi2g0208 674 Pfam Cellulose synthase 347 665 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0208 674 Pfam Cellulose synthase 49 346 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0208 674 SUPERFAMILY Nucleotide-diphospho-sugar transferases 189 482 IPR029044 -
Vvi2g0208 674 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0208 Vvi-Chr2 1780217 1783200 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0208 1 651 Glycosyltransferase AT4G24010 54.312 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0208 - - vvi:100247913 1394.02