Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0204 ATGGGAGGAGGAGGTCTAACCGATCAGAGCCAATGCCTTCCTCTTCACACACGGGCGCTACCGCATCACACCAGCGCAAACCGAGTATTTGCAGTTGTCTACTTGTGTGCCATCTTAGCTCTGCTGTATCATCACTTCCTTGCTCTACTTCACACCACCACCGTAGTCTCCCTCCTCTTTCTTCTAGCTGATGCAGTGCTGGCTTTCATGTGGGCAACCGCACAGGCCTTTCGGATGTGTCCAACCCAACGTCAGGTTTTCATCGAACACCTTCAACATGTTGCCAAGGAGAGTGATTATCCGGCACTGGATGTGTTTATCTGCACTGCTGATCCATACAAGGAGCCACCTATAAGTGTGGTGAACACTGCTCTATCTGTGATGGCATATGATTATCCAACAGAGAAATTGTCAGTATATGTATCAGATGATGGAGGTTCGCAGCTGACCCTCTTTGCTTTCATGGGGGCTGCTAGGTTTGCAACCCACTGGCTACCTTACTGCAGGAAGAACAAGATTTTAGAGAGGTGTCCAGAGGCCTATTTTGAATCAAACCCCTCATCGTGGTTCCCTGAGGCTGATCAAATTAAGCTGATGTACGAGAACATGAGAGTTAGGGTGGAGACTGCGGTTAAGAGTGGGATAATTAGCCATGATTATATCAATAGCAAGCAGGAATTGGAAGCTTTCATCAGATGGACTGATGGATTTACATCTCAGAATCATCCTGCAGTGATTCAGGTTTTGTTGGAGTGTGGTAAAGATGAGGATGTCATGGGCCATACGATGCCCAACCTTGTTTACGTATCCAGAGGGAAAAGCATCAATTTGCCCCACAATTTCAAGGCTGGTGCTCTTAATGCCCTGCTTCGTGTATCAGCCACCATGACTAATGCACCAGTGATCCTGACCCTAGATAGCGACATGTACTCCAATGATCCACAGACACCTCTTCGTGTGCTGTGTTATCTCTTAGACCCCTCTATGGATCCAAAACTTGCGTATGTTCAGTTTCCTCAGATCTTCTATGCGATCAACAAGAATGATATTTATGGTGGTGAAGCCAGGCATGTATTTCAAACTCATCCCACGGGAATGGATGTACTGAAAGGCCCTATATATCTAGGTACAGGAGGTTTTTTCCGGCGAAAAGTCTTCTTTGGGGACCCATCAGAAACCTTTGAATTGAAGCAGGATCACCTAGGGAGCAAGTCAATCAAGTCCAGGGAAATTTTAGCATCGGCGCATCATGTTGCAGACTGCAATTTTGAGAGCCAGAGCCAATGGGGCACCAAGATGGGCTTTAGGTATGGATCACTGGTTGAGGACATGTACACTAGCTATATGCTTCAATGTGAGGGATGGAAGTCCATTTTTTGCCATCCCAAAAGGCCTGCATTTCTCCCCCAGCTAGCCCTACTCAAACCAGCCATAATAAACTTGGTCTCATTCCTATGGGGCATGAACTACTATTATTTCCATATTCTTGGCTTGGGCTCTTTGCATAATTCATGGTTTCGAATTTTACATGTATCAAATCCTTGGTTTTTCTTATATGTATTTCTTTTCCTCGGAGCATTTACTCAAGATTATCTCGACTTCATATTATTTGGGGGAACAACCCAAAATTGGTGGAACAATCAGAGAGCATGGATGATTCGGGGACTAACAGGTTTCTCATTTGGATCTGTGGAATACCTTCTAAAATCATTAGGTATTTCCCCATATGGATTTAATGTGACAAGCAAGGTGGTGGATGAGGAACAAAGCAAGCGATACAATCAAGGGGAGTTTGAGTTTGGAGCCCCATCACCTTTGTTCTTGCCATTAGCAACAGCAGCAATACTCAACTTGGTCTCTTTCCCCATTGGGAATCATACAAGTTCTCAATCAAAGAAGCCTTGA 1905 0.4504 MGGGGLTDQSQCLPLHTRALPHHTSANRVFAVVYLCAILALLYHHFLALLHTTTVVSLLFLLADAVLAFMWATAQAFRMCPTQRQVFIEHLQHVAKESDYPALDVFICTADPYKEPPISVVNTALSVMAYDYPTEKLSVYVSDDGGSQLTLFAFMGAARFATHWLPYCRKNKILERCPEAYFESNPSSWFPEADQIKLMYENMRVRVETAVKSGIISHDYINSKQELEAFIRWTDGFTSQNHPAVIQVLLECGKDEDVMGHTMPNLVYVSRGKSINLPHNFKAGALNALLRVSATMTNAPVILTLDSDMYSNDPQTPLRVLCYLLDPSMDPKLAYVQFPQIFYAINKNDIYGGEARHVFQTHPTGMDVLKGPIYLGTGGFFRRKVFFGDPSETFELKQDHLGSKSIKSREILASAHHVADCNFESQSQWGTKMGFRYGSLVEDMYTSYMLQCEGWKSIFCHPKRPAFLPQLALLKPAIINLVSFLWGMNYYYFHILGLGSLHNSWFRILHVSNPWFFLYVFLFLGAFTQDYLDFILFGGTTQNWWNNQRAWMIRGLTGFSFGSVEYLLKSLGISPYGFNVTSKVVDEEQSKRYNQGEFEFGAPSPLFLPLATAAILNLVSFPIGNHTSSQSKKP* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0204 634 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 537 IPR029044 -
Vvi2g0204 634 FunFam Cellulose synthase-like protein G3 230 388 - -
Vvi2g0204 634 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 15 470 - -
Vvi2g0204 634 Pfam Cellulose synthase 405 467 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0204 634 Pfam Cellulose synthase 103 399 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0204 634 Pfam Cellulose synthase 500 624 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0204 634 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 224 388 IPR029044 -
Vvi2g0204 634 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 176 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0204 Vvi-Chr2 1740539 1744830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0204 15 624 Glycosyltransferase AT4G24010 48.323 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0204 - - vvi:100258169 1061.6