Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0203 ATGGGCTTTAGATATAGTCCAATCACCTATGGAATCCGATCCATAAACCATCTCTCTGGGCTATGTTATGCTCACTACACCTTCGGTCCCATATGGTCCATTCCAATTACCATCAATGCCTTTGTCCCCCAGCTAGCTCTGCTTAACTGTGCTTCAATCTTCCTAAAGGCCTCAGACACTTGGCTTTTATTGTACATATTTCTTTTCCTTGGGGCCTATGGGCACCAGTGTCTCAAGTTTATGTTAGCTGGAGAAACAATCCAAAGGACGTGGATCAATCAGAGGATTTGGACAATTAAGGGACTCTCAAGCTTCATTTTTGGATTGGCTGAATACTTACTGAAGTTCATTGGCATTTCCACATTTGGATTTAATGTCACAAGCAACGTAGTTGAAGAGGAACAAAACAAGTGA 414 0.4203 MGFRYSPITYGIRSINHLSGLCYAHYTFGPIWSIPITINAFVPQLALLNCASIFLKASDTWLLLYIFLFLGAYGHQCLKFMLAGETIQRTWINQRIWTIKGLSSFIFGLAEYLLKFIGISTFGFNVTSNVVEEEQNK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0203 137 Pfam Cellulose synthase 4 135 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0203 137 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0203 Vvi-Chr2 1738695 1739379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0203 4 137 Glycosyltransferase AT4G24010 49.254 2.08e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0203 - - vvi:100256514 231.491