Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0202 ATGTGGGTGACCGCACAGGCTTTTCGCATGTATCCAACCGATCGTCAGGTTTTCGTCGAACACCTTGAGCAATACGTCAAGGAGAGTGATTATCCGGGGCTGGATGTGTTTATATGCACTGCTGATCCATACAAGGAGCCACCTATGAGTGTGGTGAACACAGCTCTATCTGTGATGGCATATGATTATCCGACAGAGAAGTTGTCGGTATATGTATCGGATGATGGAGGTTCCAAGCTCACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCCGCCCACTGGCTGCCTTATTGCAGGAAGAACAAGGTTGTGGAGAGGTGTCCAAAGGCACATTTTGGATCCTCCAACCCCTCAAGGTTCCCAGAGACCGATCAGATCAAGATGATGTACGAGAGCATGAGAGTGAGGGTGGAGAATGTGGTAAAGAGAGGGAGCATAAGCCATGATTATATCACTAAGGAAGGAGAAAGTGAAGCTCTCAGCAGATGGACAGATGGATTTACACCTCAGAACCATCCTCCAGTAGTTCAGGTACTATTAGAGCATGGCAAAGACAAGGATGTCACTGGCCATGGGATGCCAAACCTTGTATACATCTCCAGAGAGAAAAGCACAGATTCTCCCCACCGTTTCAAGGCTGGTGCCCTTAACGTCCTGCTCCGAGTATCAGCCACCATGACAAATGCACCAGTGATCCTTACCCTGGATAGCGACATGTACTCCAACGATCCACAGACGCCTCTGCGGGCGCTGTGCTACCTTTTAGATCCTTCCATGGATCCAAAACTTGGGTACGTTCAGTTTCCTCAGGTTTTCCATGGGATCAACAAGAATGATATCTATGGGGGTGAACTGAGCCATGTGTTTGAAGTTCATATGCCCGGAATGGATGGACTAGCAGGCCCCATACATGTCGGCTCTGGAGGTTTTTTCCGCCGAAGAGTCTTCTATGGTTGCCCATCTGAAACCCTGGAAATGAACCGGGATCGGCAGGTTAGCCATTCAATCAAGTCTAGAGAGGTTTTGGCAATGGCACACCATGTCGCAGGCTGCAAGTATGAGAACCAAACCGAATGGGGCAGAAAGATGGGTTTTAGGTATGGCTCTTTGGTTGAGGACTTGTACACAAGCTGTCTGCTGCAATGTGAAGGATGGAAGTCCATTTATTGTAATCCTAAAAGGCCTGCATTTCTAGGGGAGTCACCCATCAACCTCCATGATTTTCTGAATCAAACCATGAGATGGTCAGTTGGCCTTCTTGAAGTTGCCTTCTCCAGATATAGCCCAATCACCTTTGGAGTCCAATCGATAAGCCTCCTTTCAGGGCTATGTTTTGCTCATTATACCTTCTGGGCGATTTGGGCGATTCCTGTCACCATCTATGCCTTTCTCCCCCAGCTAGCTCTGCTCAATTCTGCCTCAATATTCCCAAAGATATCAGATCCTTGGTGTTGGTTATATGTGGTTCTTTTCCTTGGAGCCTATGGACAAGACTATCTTGAGTTTGTATTATCCGGCGGGCCGACACAAAGGTGGTGGAACCATCAGAGGGCGTGGATGATGAGGGGACTGTCGAGTTTCACGTTCGGATTGGTTGAGTACTTGCTGAAGTATGTTGGCATTTCCACATTTGGGTTTAATGTGACGAGCAAGGTGGTTGAAGAAGAACAAAGCAAGCGATACAAGCAGGGGATCTTCGAGTTTGGAGTCCCATCCCCGGTTTTCTTGCCGCTAACCACAGCAGCAATAATCAACTTGGTCGCATTCCTATCCGGCATTGCTCAAGCCGGCAGGCAAAGAAGCATAGAAGATGTGTTTCTTCAACTGTTCTTGGCTGGTTTTGCAGTGGTCAACTGCTGGCCAGTATATGAAGCCATGGCCTGGAGGCGAGACCAAGGGAAATTGCCTCTGAAAATTACTGTGATTTCTGTAGTTCTAGCATGGGCTCTTTACTCAACATCCTCTATGGCATTTTGA 1980 0.4803 MWVTAQAFRMYPTDRQVFVEHLEQYVKESDYPGLDVFICTADPYKEPPMSVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAARFAAHWLPYCRKNKVVERCPKAHFGSSNPSRFPETDQIKMMYESMRVRVENVVKRGSISHDYITKEGESEALSRWTDGFTPQNHPPVVQVLLEHGKDKDVTGHGMPNLVYISREKSTDSPHRFKAGALNVLLRVSATMTNAPVILTLDSDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQVFHGINKNDIYGGELSHVFEVHMPGMDGLAGPIHVGSGGFFRRRVFYGCPSETLEMNRDRQVSHSIKSREVLAMAHHVAGCKYENQTEWGRKMGFRYGSLVEDLYTSCLLQCEGWKSIYCNPKRPAFLGESPINLHDFLNQTMRWSVGLLEVAFSRYSPITFGVQSISLLSGLCFAHYTFWAIWAIPVTIYAFLPQLALLNSASIFPKISDPWCWLYVVLFLGAYGQDYLEFVLSGGPTQRWWNHQRAWMMRGLSSFTFGLVEYLLKYVGISTFGFNVTSKVVEEEQSKRYKQGIFEFGVPSPVFLPLTTAAIINLVAFLSGIAQAGRQRSIEDVFLQLFLAGFAVVNCWPVYEAMAWRRDQGKLPLKITVISVVLAWALYSTSSMAF* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0202 659 FunFam Cellulose synthase isolog 22 121 - -
Vvi2g0202 659 SUPERFAMILY Nucleotide-diphospho-sugar transferases 44 467 IPR029044 -
Vvi2g0202 659 FunFam Cellulose synthase-like protein G3 161 319 - -
Vvi2g0202 659 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 117 IPR029044 -
Vvi2g0202 659 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 165 325 IPR029044 -
Vvi2g0202 659 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 643 - -
Vvi2g0202 659 Pfam Cellulose synthase 331 650 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0202 659 Pfam Cellulose synthase 34 329 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0202 Vvi-Chr2 1733978 1737009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0202 1 636 Glycosyltransferase AT4G24010 55.487 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0202 - - vvi:100244488 1361.67