Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0201 ATGGGAGGTGAGGGGGCGACTGAGAGGAAGAGCACCGCCAGCCATGGCCTTCCTCTTCTTCACACAAGGGCGCTCATGCGTCGGACCCCAGCAAACCGAGTATTCGCAGTTGTATACTTGTGTGTCATCTTGGCTCTGCTATATCACCATTTCATCGCTCTACTCCATTCCACCTCCATAGTCTCCCTCCTCATTCTTCTAGCTGACGCAGTGCTGGCTTTCATGTGGGTAACTACTCTGGCTTTTCGCATGTGTCCCACAGAACGTCAGATTTTCATTGAACACCTTGAGCATTATGCCAAGGAGAGTAATTACCCGGGTTTGGATGTGTTTATATGCACTGCTGATCCATATAAGGAGCCACCGATTGATGTGGTGAACACTGCTCTGTCTGTGATGGCATACGATTATCCAACAGAGAAGCTGTCGGTATATGTGTCGGATGATGGAGGTTCCCAGCTGACTCTCTTTGCTTTTATGGAGGCTGCAAGGTTTGCCTCCCACTGGCTACCCTACTGTAAGAAGAACAAGATTGTAGAGAGGTGCCCCAAAGCTTATTTTGCGTCCAACCCCTCATGGTTCCCTGAGACCGATCAGATTAAGCTGATGTACGAGAAAATGAGAGTTAGGGTGGAGACTGCGGTTAAGAGTGGGATAATTAGCCATGATTATATGAATAGCAAGCAGGAATTGGAGGCTTTCAGCAGATGGACTGATGGATTTACATCTCAGAATCATCCTGCAGTGATTCAGGTTTTGTTGGAGTGTGGTAAAGATGAGGATGTCATGGGCCATACGATGCCCAACCTTGTTTATGTATCCAGAGGGAAAAGCATCAATTTGCCCCACAATTTCAAGGCTGGTGCTCTTAATGCCCTGCTTCGAGTATCAGCCACCATGACAAACGCACCAGTGATCTTGACCCTAGACAGCGACATGTACTCCAATGATCCACGGACACCTCTTCGCGTGCTGTGCTATCTTTTAGACCCTTCAATGGATCCAAAACTTGGGTATGTTCAGTTTCCGCAGATCTTCCATGGGATCAACAAGAGTGATATATATGGTGGTGAACTAAGGCATGTGTTTCAAGTTCAAATGTCCGGAATGGATGGGTTGGCAGGCCCTCAACATGTAGGTTCTGGAGGTTTTTTCCGGCGAAAAATCTTCTTTGGTGGCCCATCAGAAACCCCAGAAATGAACCAGGATCAACTGACGAGCAAATCGATCAGGTCCAAAGAAGTTTTAGCAATGGCTCACCAAGTTGCAGGCTGCAATTTTGAGAACCAAACCAAGTGGGGCACCAAGATGGGCTTTAGGTATGGTTCTTTGGTTGAGGACTTGTACACGAGCCATCAGCTGCAATGTGAGGGATGGAAATCCATTAATTGCAAACCTAAAAGGCCTGCATTTCTGGGAAATTCACCCCTCAACCTCCATGACTTGCTGAATCAAACTACGCGTTGGTCAGTCGGCCTCCTTGAAATAGCCTTCTGCAAATATAGCCCGATCATCTATGGAGTCCGGTCCATAAACCTTCTGTCAGGGCTAGGTTTTGCTTATTATGCCTTCTGGCCTTTTTGGTCGATTCCCCTTACCATCTATGCCTTTCTCCCCCAGCTGGCTCTGCTCAATTCCGCCTCAATCTTCCCACAGGTCTCAGATCTTTGGTTTTTCATCTATGTATTCCTTTTCCTTGGAGCCTATGGACAAGATTATTTGGAGTTCATATTATCCGGGGGGACAACGGTAAGGTGGTGGAACAATCAGAGAATGTGGATGATGAGAGGACTCTCAAGTTTCTCATTTGGGTGGATTGAATACTTCCTGAAGTCCAACGGGATTTCGACTTTCGGGTTTAAAGTGACAAGCAAGGTGGTTCAAGAGGAGCAAAGCAAGCGATACAAGCAAGGGATCTTCGAGTTTGGAGTTGCATCACCCTTGTTCTTGCCACTAACAACAGCAGCCATAATCAACTTGGCCTCATTCCTAAGGGGCATTGCACTAGTCTTAAAACAAGGAAGGCTTGAGGATCTACTTCTGCAGATGTTGTTAGCTGGTTTCGGAATGGTGAACTGCTGGCCCATATATGAAGCCATGGTGTTGAGGACTGATGAAGGGAAATTGCCAGTGAAGATCACATTGATCTCAATTGTTCTAGCATGGGCTCTTTACAGATTATTAGCATCTTCCATGGCATTTTGA 2205 0.4671 MGGEGATERKSTASHGLPLLHTRALMRRTPANRVFAVVYLCVILALLYHHFIALLHSTSIVSLLILLADAVLAFMWVTTLAFRMCPTERQIFIEHLEHYAKESNYPGLDVFICTADPYKEPPIDVVNTALSVMAYDYPTEKLSVYVSDDGGSQLTLFAFMEAARFASHWLPYCKKNKIVERCPKAYFASNPSWFPETDQIKLMYEKMRVRVETAVKSGIISHDYMNSKQELEAFSRWTDGFTSQNHPAVIQVLLECGKDEDVMGHTMPNLVYVSRGKSINLPHNFKAGALNALLRVSATMTNAPVILTLDSDMYSNDPRTPLRVLCYLLDPSMDPKLGYVQFPQIFHGINKSDIYGGELRHVFQVQMSGMDGLAGPQHVGSGGFFRRKIFFGGPSETPEMNQDQLTSKSIRSKEVLAMAHQVAGCNFENQTKWGTKMGFRYGSLVEDLYTSHQLQCEGWKSINCKPKRPAFLGNSPLNLHDLLNQTTRWSVGLLEIAFCKYSPIIYGVRSINLLSGLGFAYYAFWPFWSIPLTIYAFLPQLALLNSASIFPQVSDLWFFIYVFLFLGAYGQDYLEFILSGGTTVRWWNNQRMWMMRGLSSFSFGWIEYFLKSNGISTFGFKVTSKVVQEEQSKRYKQGIFEFGVASPLFLPLTTAAIINLASFLRGIALVLKQGRLEDLLLQMLLAGFGMVNCWPIYEAMVLRTDEGKLPVKITLISIVLAWALYRLLASSMAF* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0201 734 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 397 IPR029044 -
Vvi2g0201 734 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 570 IPR029044 -
Vvi2g0201 734 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 25 715 - -
Vvi2g0201 734 FunFam Cellulose synthase-like protein G3 234 392 - -
Vvi2g0201 734 FunFam Cellulose synthase isolog 96 193 - -
Vvi2g0201 734 Pfam Cellulose synthase 108 402 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0201 734 Pfam Cellulose synthase 406 724 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0201 Vvi-Chr2 1728287 1732541 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0201 7 717 Glycosyltransferase AT4G24010 52.843 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0201 - - vvi:100246145 1336.24