Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0200 ATGGGAGGGGGAGAGCCGACTGAGAGGAAGAGCACCGCCAGCCATGGCCTTCCTCTTCTTCACACAAGGGCGCTCATGCGTCGGACCCCAGCAAACAGAGTATTCGCAGTTGTATATTTGTGTGTCATCTTGGCTCTGCTATATCACCATTTCATTGCTCTACTCCATTCCGCTTCCATAGTCTCCTTCCTCATTCTTCTAGCTGACGCAGTGCTGGCTTTCATGTGGGTAGCTACTCTGGCTTTTCGCATGTGTCCCACAGAACGTCAGATTTTCATTGAACACCTTGAGCATTATGCCAAGGAGAGTAATTACCCGGGTTTGGATGTGTTTATATGCACTGCTGATCCATATAAGGAGCCACCGATTGATGTGGTGAACACTGCTCTGTCTGTGATGGCATACGATTATCCAACAGAGAAGCTGTCGGTATATGTGTCGGATGATGGAGGTTCCCAGCTGACTCTCTTTGCTTTTATGGAGGCTGCAAGGTTTGCCTCCCACTGGCTACCCTACTGTAAGAAGAACAAGATTGTAGAGAGGTGCCCCAAAGCTTATTTAACATGGGCTCACATTGATCTCAATTATTCTAGCATGGGCTCTTTATTTAACATCTTCGATAGCATTCTAAGATATGGGGACTTGATTAATTTTCTCATTGTTTGCTCCATTAGTTCCCTAGTTGAATCAAGAAGAGACACATCATTTTTACTTAACATCATGTCTACCTTTTTTGGAAAGAAAACAAGAGTACCTCAACCAACATGGATATCTACGTGGCTAAGACAGTCTAAATAG 798 0.4474 MGGGEPTERKSTASHGLPLLHTRALMRRTPANRVFAVVYLCVILALLYHHFIALLHSASIVSFLILLADAVLAFMWVATLAFRMCPTERQIFIEHLEHYAKESNYPGLDVFICTADPYKEPPIDVVNTALSVMAYDYPTEKLSVYVSDDGGSQLTLFAFMEAARFASHWLPYCKKNKIVERCPKAYLTWAHIDLNYSSMGSLFNIFDSILRYGDLINFLIVCSISSLVESRRDTSFLLNIMSTFFGKKTRVPQPTWISTWLRQSK* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0200 265 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 25 189 - -
Vvi2g0200 265 FunFam Cellulose synthase isolog 96 193 - -
Vvi2g0200 265 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 96 186 IPR029044 -
Vvi2g0200 265 Pfam Cellulose synthase 108 188 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0200 Vvi-Chr2 1727004 1727801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0200 7 188 Glycosyltransferase AT4G24010 52.174 1.64e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0200 - - vvi:100246145 350.132