Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0199 ATGTTGTCTGGAGGATCAATCCAAAGGTGGTGGAATGATCAGAGGGTGTGGATGATGAGAGGGCTCACAAGTATGTTGTTTGGATTGGCGGAATACTTACTGAAGACCATTGGCATTTCCACATTTGGATTTAGTGTCACAAACAAGACTGTTGAAGAGGAACAAAGCAAGCGATACGGCCAAGGGCTGTTCGAGTTTGGAGTCTCATCACCCTTGCTATTGCCAATGACAACGGCTGCCATAATCAACTGCATCTCTTTCCTTTGGGGCATTGCCCAAGTCTTCACACAAGGAAGGCTTGAAGGTATACTTCTACAGATGTTCTCGGCAGTCTTTGCAATGGTAAATTGCTGGCCAATATATGAAGCCATTCTTTTTGCGGACGGATGA 390 0.4538 MLSGGSIQRWWNDQRVWMMRGLTSMLFGLAEYLLKTIGISTFGFSVTNKTVEEEQSKRYGQGLFEFGVSSPLLLPMTTAAIINCISFLWGIAQVFTQGRLEGILLQMFSAVFAMVNCWPIYEAILFADG* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0199 129 Pfam Cellulose synthase 3 123 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0199 129 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0199 Vvi-Chr2 1719586 1719975 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0199 1 125 Glycosyltransferase AT4G23990 52.381 1.27e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0199 - - vvi:100267402 240.35