Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0198 ATGACCGATGCACCAATAATCCTAACACTGGATAGTGACATGTTCTCCAATGATCCACAAACACCTCTTCGTGTGCTGTGTTATCTCTTGGACCCTTCTATGGATTCCAAACTTGAGTACATTCAGTTCCCTCAGATCTTTGATGGGATAAATAAGAATGATATTTATGGAGGGAAACACAAATTAGCGTACCAAATTCAAACCAAGGGAATGCATGGATTGGCTGACCCTATATATGTAGGTACTGGATGCTTTTTCAGGCGAAGAGTCCTCTTTGGTGGCCCATCGGAAATCCCAAAACTGAACCAGGATCATCGAGCTGCGAGCGAGTCAATCAAGTCGGAAGAAGTTTTAACAATGGCACACCATGTTGCAGGCTGCACTTATGAGAAGGAAACTACATGA 405 0.4321 MTDAPIILTLDSDMFSNDPQTPLRVLCYLLDPSMDSKLEYIQFPQIFDGINKNDIYGGKHKLAYQIQTKGMHGLADPIYVGTGCFFRRRVLFGGPSEIPKLNQDHRAASESIKSEEVLTMAHHVAGCTYEKETT* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0198 134 Pfam Cellulose synthase 1 104 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0198 134 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 98 IPR029044 -
Vvi2g0198 134 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0198 Vvi-Chr2 1718398 1718802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0198 1 133 Glycosyltransferase AT4G24010 53.285 6.56e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0198 - - vvi:100258251 204.527