Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0197 ATGGGAGATTCAACTGGGGGCAAGAGCAGCACCATCCATGTCCCTCTTCACATTCGTGTGCCACTGAGTCGAACCTCTGCAAACCGAGTATTTGCTTTCTTCTACTCTTTAGCCATCTTAGCTCTGCTGTATCACCGTTGCATTGCTCTACTCCAGTCCTTCACCATAGTCTCCCTCCTCATTCTTATGGCTGATGCAGTGCTGGCTTTCATGTGGGCAACCTCACAGGCCTTTCGCATGTGTCCAGTGGGTCGTCGGGTTTTCATTGAACACCTTGAACATTATGCCAAGGAAAGTGATTATCCGAGGTTGGACGTGTTTGTATGCACTTCTGATCCATATAAGGAGCCACCTATGTGTGCGGTGAACACTGCTCTATCTGTGATGTCTTATGATTATCCAACAGAGAAGTTGTCGGTCTATGTATCAGATGACGGAGGTTCCAAGCTGACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCTGCCCTCTGGCTGCCTTACTGCAAGAAGAACAAGATTGTAGAGAGGTGTCCAGAGGCATATTTTAGATCTAATCTCTCATGGTTTCCCGAGACTGATCAAATTAAGATGATGTATGAGAATATGAGAGATAGGGTGGAGAAAGCTGTCCAGAAAGGGAGCATTTGCTATGATTATCTCACTAATGAAGGAGAAGGTGAAGCTTTCAGCAGATGGACAGATGGATTTACACCTCAGAATCATCCTCCAGTAATTCAGCAGGTTTTGTTAGAGAGCAGTAAGGATAAGGACAACGCTAGCCATACCATGCCCAACCTTGTGTATATCTCCAGAGGGAAAAGCACGACTTTGCCCCACCATTTCAAAGCTGGTGCACTTAATGTCCTTCTACGAGTATCAGGCACCATGAGCAACGCACCAGTAATCCTAACACTAGATACTGATATGTACTCCAATGATCCTCAAACACCGCTTCGTGTGCTGTGTTATCTCTTGGACCCTGCTATGGATCCCAAACTGGGGTACATTCAGTTTCCTCAGATCTTCCATGGAATCAATGAGAATGATATTTATGGAGGTCAACTCAAATTAGAGTTCCAAATTGAAGCCAGTGGAATGGATGGATTGGTTGGCTCTACATATACAGGTACTGGATGCTTTTTCAGGCGTGGAGTCTTCTTTGGTGGTCCATTAGAAACCCCAGAACTGAACCAGGATCATCTAGTGAACAAGTCAATCAATTCCAAAGAAGTTTTAGCAATGGCACACCATGTTGCAGACTGCAATTTTGAGAAGCAAACCAAATGGGGCACTGAAATTGGCTTCAGATATGGAACATTGGTTGAGGACTTCTATACCGACTATCTGCTAAAATGTAAGGGTTGGAAGTCCATTTTCTGCAACCCTAAAAGGCCTGCATTTCTGGGAAATTCACCTATCAATCTCCACAGCACACTGAATCAACTTATGCGATGGTCTGTTGGCCTCCTCGAAGTGGCCTTCTGCAGATATAGTCCCATCACCTTCGGAGTCAAGTCCATAAACCCTCTCACAGGGCTATGTTATGCTCACTACGCCTTCTGGCCAATATGGTCCATTCCAATTACCATCTATGCCTTTGTCCCCCAGATAGCTCTGCTCAATTGTGCCTCAATCTTCCCAAAGGCCTCAGACCCTTGGTTTTTATTGTACATATTCCTTTTCCTTGGTGCCTATGGGCAAGAGTGTCTCGAGTTTATGTTAGCTGGAGAAACAATCCAAAGATGGTGGAACAATCAAAGGATGTGGACAATTAGGGGACTCTCAAGCTTCATTTTTGGATTGGTTGAATGCTTACTGAAGTTCATTGGCATTTCCACATTTGGATTTAATGTCACAAGCAAGGTAATTGAAGAAGAACAAAGAAAGCGATATAACCAAGGGATTTTCGAGTTTGGAGTCCCATCACCCTTGTTCTTGCCCATGACAACAGCTGCAGTAATCAACTTGGTCTCATTCCTATGGGGCATAGTACAAGTTTTCAAGCAAAGAGAGCTTGAAGGTCTATTTACGCAGATGCTCTTAGCCGGTTTTGCAATAGTGAATTGCTGGCCCCTATATGAAGCCATGGTCTTGAGGACTGATGAAGGAAAGATGCCTGTGAAGATCACATTGATCTCAATTACACTTGCATGGGCTCTTTACTTGGTATCCTCCATTGCATTTTAA 2190 0.4447 MGDSTGGKSSTIHVPLHIRVPLSRTSANRVFAFFYSLAILALLYHRCIALLQSFTIVSLLILMADAVLAFMWATSQAFRMCPVGRRVFIEHLEHYAKESDYPRLDVFVCTSDPYKEPPMCAVNTALSVMSYDYPTEKLSVYVSDDGGSKLTLFAFMEAARFAALWLPYCKKNKIVERCPEAYFRSNLSWFPETDQIKMMYENMRDRVEKAVQKGSICYDYLTNEGEGEAFSRWTDGFTPQNHPPVIQQVLLESSKDKDNASHTMPNLVYISRGKSTTLPHHFKAGALNVLLRVSGTMSNAPVILTLDTDMYSNDPQTPLRVLCYLLDPAMDPKLGYIQFPQIFHGINENDIYGGQLKLEFQIEASGMDGLVGSTYTGTGCFFRRGVFFGGPLETPELNQDHLVNKSINSKEVLAMAHHVADCNFEKQTKWGTEIGFRYGTLVEDFYTDYLLKCKGWKSIFCNPKRPAFLGNSPINLHSTLNQLMRWSVGLLEVAFCRYSPITFGVKSINPLTGLCYAHYAFWPIWSIPITIYAFVPQIALLNCASIFPKASDPWFLLYIFLFLGAYGQECLEFMLAGETIQRWWNNQRMWTIRGLSSFIFGLVECLLKFIGISTFGFNVTSKVIEEEQRKRYNQGIFEFGVPSPLFLPMTTAAVINLVSFLWGIVQVFKQRELEGLFTQMLLAGFAIVNCWPLYEAMVLRTDEGKMPVKITLISITLAWALYLVSSIAF* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0197 729 Pfam Cellulose synthase 400 724 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0197 729 Pfam Cellulose synthase 104 389 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0197 729 SUPERFAMILY Nucleotide-diphospho-sugar transferases 119 537 IPR029044 -
Vvi2g0197 729 FunFam Cellulose synthase-like protein G3 230 389 - -
Vvi2g0197 729 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 389 IPR029044 -
Vvi2g0197 729 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 93 180 IPR029044 -
Vvi2g0197 729 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 15 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0197 Vvi-Chr2 1711563 1714927 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0197 5 724 Glycosyltransferase AT4G24010 51.507 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0197 - - vvi:100256514 1491.09