Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0196 ATGGTGATGAAAAATAAGCAGGAAATATCAGCCTCAGACCCTTGGTTTTTATTGTACATATTCCTTTTCCTTGGTGCCTATGGGCAAAAATGTCTCGAGTTTATGTTAGCTGGAGAAACAATCCAAAGATGGTGGAACAATCAAAGGATGTGGACAATTAGGGGACTCTCAAGCTTAATTTTTGGATTGGTTGAATACTTACTGAAGTTCATTGGCATTTCCACATTTGGATTTAATGTCACAAGCAAGGTAATTGAAGAAGAACAAAGAAAGCGATATAACCAAGGGATTTTCGAGTTTGGAGTCCCATCACCCTTGTTCTTGCCCATGACAACAGTTGCAGTAATCAACTTGGTCTCATTCCTATGGGGCATAGTACAACTATGA 387 0.3902 MVMKNKQEISASDPWFLLYIFLFLGAYGQKCLEFMLAGETIQRWWNNQRMWTIRGLSSLIFGLVEYLLKFIGISTFGFNVTSKVIEEEQRKRYNQGIFEFGVPSPLFLPMTTVAVINLVSFLWGIVQL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0196 128 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 126 - -
Vvi2g0196 128 Pfam Cellulose synthase 12 126 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0196 Vvi-Chr2 1706216 1710474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0196 11 128 Glycosyltransferase AT4G23990 60.504 2.74e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0196 - - vvi:104881920 244.588