Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0194 ATGACTAATGCACCAGTGATCCTGCCCCTAGATAGCGATATGTATTCCAATGATCCACAGACACCTCTTCGTGCGCTGTGTTATATCTTAGACCCCTCTATGGATCCCAAACTTGCGTATGTTCAGTTTCCTCAGATCTTCTATGGGATCAACAAGAATGATATTTATGGTGGTGAAGCCAGGCATGGAATGCTAATTCATCCCGCGGGAATGGATGGACTGAAAGGCCCTATGTATCTAGGTACAGGAGGGTTTTTCCAGAGAAAAGTTTTCTTTGGGGGCCCATTAGAAACCTCTGAACTGACCCAGGATCACATAGCGAGCAAGTCGATCAAGTCCAGGGAAATTTTAGCATCCGCCCACCATGTTGCAGACTGCAATTTTGAGAGCCAGACCCAATGGGGCACCAAGGTCGGCTTTAGGTATGGATCACTGGCTGAGGACTTCTACACTAGCTATATGCTTCAATGTGAGGGATGGAAGTCCATTTTTTGCCATCCTACAAGGCCTGCGTTTCTGGGAAATTCACCCATCAATTTGCATGACTTTCTGAATCAAACCAGGCTATGGTCAATCGGCCTCCTTGAAGTGGCCTTCTGCAAATATAGCCCAATCACATATGGCACCCGCACCATAAACCTTCTCAGTGGCCTATGTTTTGCTTACTATTCCTTATGGCCCATTTGGTCAATTCCCATTGCGATCTATGCCTTTCTCCCCCAGCTAGCTCTGCTTAAGCATGTCTCGATCTTCCCAAAGATGTCAGATCCCTGGTTTTTTGTGTATATATTCTGTTTTCTTGGAGCTTACGGACAAGATTATCTCGAGTTAATAATATCTGGGGGCACAACTCAAAGGTGGTGGAACAATCAGAGAGCATGGATGATGAGGGGGCTCTCGAGTTACTCAATTGGGTCGGTTGAATACATCCTCAAGTCTATTGGCATTTCCACATTCCAATTCAGTGTGACAAGCAAGGCTGTGGGAGAGGAACAAAGCAAGCGATACAAGAAAGGGATGTTCGAGTTTGGAGTCGTATCACCCTTATTCTTGCCACTAACAACAGCAGCAATAATCAACTTGGTCTCATTCCTATGGGCCATTGCACAAGTCTTCGGGCAAGGAAGCATTGAAGGTCTACTTCTGCAGATTTTGTTAGTTGGTTTTGCAATGGTGAACTGTTGGCCCATATATGAAGCCATGGTGTTGAGGGCTGATGAAGGAAAGATGCCAGTGAAGATCACATTGATCTCAATTGTCCTTGCATGGGCTCTTTACTTGGTATCTTCCATAGCATTTTAA 1302 0.4531 MTNAPVILPLDSDMYSNDPQTPLRALCYILDPSMDPKLAYVQFPQIFYGINKNDIYGGEARHGMLIHPAGMDGLKGPMYLGTGGFFQRKVFFGGPLETSELTQDHIASKSIKSREILASAHHVADCNFESQTQWGTKVGFRYGSLAEDFYTSYMLQCEGWKSIFCHPTRPAFLGNSPINLHDFLNQTRLWSIGLLEVAFCKYSPITYGTRTINLLSGLCFAYYSLWPIWSIPIAIYAFLPQLALLKHVSIFPKMSDPWFFVYIFCFLGAYGQDYLELIISGGTTQRWWNNQRAWMMRGLSSYSIGSVEYILKSIGISTFQFSVTSKAVGEEQSKRYKKGMFEFGVVSPLFLPLTTAAIINLVSFLWAIAQVFGQGSIEGLLLQILLVGFAMVNCWPIYEAMVLRADEGKMPVKITLISIVLAWALYLVSSIAF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0194 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 122 IPR029044 -
Vvi2g0194 433 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 417 - -
Vvi2g0194 433 Pfam Cellulose synthase 105 428 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0194 433 Pfam Cellulose synthase 1 96 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0194 Vvi-Chr2 1701322 1702798 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0194 1 433 Glycosyltransferase AT4G23990 53.075 1.26e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0194 - - vvi:100258169 808.905