Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0191 ATGCCCAACCTCGTCTATGTATCCAGAGAGAAAAGGCCCGGTTCACCCCACCATTTCAAGGCTGGTGCCCTTAATGTCCTGATTCGAGTGTCAGCCACCATGACCAATGCACGAGTAGTCCTGACTCTCGACAGCGACATGCACTCAAATGATCCTCAAACACCTCTTCGCGCCCTGTGTTATCTCTTGGACCCTGATATGGATCCAAATCTCGGGTTCGTTCAGTTTCCTCAAGCCTTCCATGGGATCAACAAGAATGATATTTACGCTGGTGAGTGTATACATGTGTATCAAATTCATCCCATTGGAATGGACGGCCTAGCAGGCCCCATGCATGTAGGGACTGGATGTTTTTTCCGGCGAGAAGTCTTCTCTGGTGGCCCATCCAGAACCCCCGGACAGAGCTCAGATCATCTCGTGAGCAAGTCAATCGGGAACAAAGAAGTTTTAGCATCAGCACATCATGTTTCAGCATGGAATTATGAGAATCAAACCAATTGGGGCACCAAGATGGGATACAGATATGGGTCATTGTGTGAGGACTACTGCACGGGCTATCGGCTGCATTGTGAAGGATGGAAGTCCATTTTTTGCAATCCTAAGAGGCCTGCATTTCTGGGGAGGGCACCGATTAACCTCAATGTCTGTCTGAATCAATCCAAGCGGTGGGGGGTTGGCCTCCTTGAGGTTGGGTTTTGCAAGCATAGCCCAATCGTCTTCGGCTTAATGGAGATAGGCCCTCTCATGGGTCTATGTTACGCAAACTATGCCTTCAGGCCCCTCTGGTCCATTCCAATCACCATCTATGCCTTTCTCCCCCAGCTAGCTCTACTCAAAGGTGTCTCAATCTTCCCCAAGGTCTCAGAACCTAGGTTTTTCTTATACATATTCCTTTTCGTTGGAGCATACACACAAGATTGTCTAGACTTCTTATTATCTGGAGCTACAATCCAGAGGTGGTGGAGCACCCAGAGGGTGTGGATGATGAGGGGGGTCTCAAGTTTCTCATTCTCTTTAGTCGAATACTTGCTCAAATGCATTGGCATTTCCCAATTCGGATTCAATGTGACAAGCAAGGTGGTTGACAAGGAACAAAGCAAGCGGTACAAGCAAGGGATTTTCGAGTTTGGAGTCTCATCACCCTTGTTCTTGCCGCTAACAACAGCAGCCATAATGAACTTGGTCTCATTCCTATGGGGCATGGTACTAATCTTCAAGAAGAAAAACCTGGAAGGCATGCTTTTGCAGATGTTGTTAGCTGGTTTTGTGATGGTGAACTGCTGGCCAATATATGAAGCCATGGTCTTGAGAACTGATAGAGGAAGGATGCCCACCAGAACTACTATTATTTCCATATTCTTGGCTTGGGCTCTTTGCATAATTGTTTCTGTCAGTCCAAAAATATGA 1407 0.4705 MPNLVYVSREKRPGSPHHFKAGALNVLIRVSATMTNARVVLTLDSDMHSNDPQTPLRALCYLLDPDMDPNLGFVQFPQAFHGINKNDIYAGECIHVYQIHPIGMDGLAGPMHVGTGCFFRREVFSGGPSRTPGQSSDHLVSKSIGNKEVLASAHHVSAWNYENQTNWGTKMGYRYGSLCEDYCTGYRLHCEGWKSIFCNPKRPAFLGRAPINLNVCLNQSKRWGVGLLEVGFCKHSPIVFGLMEIGPLMGLCYANYAFRPLWSIPITIYAFLPQLALLKGVSIFPKVSEPRFFLYIFLFVGAYTQDCLDFLLSGATIQRWWSTQRVWMMRGVSSFSFSLVEYLLKCIGISQFGFNVTSKVVDKEQSKRYKQGIFEFGVSSPLFLPLTTAAIMNLVSFLWGMVLIFKKKNLEGMLLQMLLAGFVMVNCWPIYEAMVLRTDRGRMPTRTTIISIFLAWALCIIVSVSPKI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0191 468 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 129 IPR029044 -
Vvi2g0191 468 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 449 - -
Vvi2g0191 468 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 296 IPR029044 -
Vvi2g0191 468 Pfam Cellulose synthase 139 461 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0191 468 Pfam Cellulose synthase 1 127 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0191 Vvi-Chr2 1686388 1688345 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0191 1 460 Glycosyltransferase AT4G23990 55.579 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0191 - - vvi:100241114 973.385