Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0190 ATGGCGAATCCATTCCAATTCCGTCCTCCTCTTCACACCCGAGTTCTCATGCGCCGAACCTCTGCATACCGAGTGTTCGCCATCTTCTACTCGTTTGCCATCTTAGCTTTGCTATATCACCATCTCATTCATCTACTCCACTCCCCAAATACACTCTCCTTCTTCATTCTTCTGGCTGATGTATTGTTTAGTTTCTTGTGGGCATCCTCGCAGGGCTTTCACATGTGTCCGACGGATCGTCGGGTCTTCATCGAACACCTTGAGCATTATGTCAAGGAGAGTGATTATCCGGGGCTGGATGTGCTTATATGCACCGCTGATCTACACAAGGAGCCACCTATGGGTGTGGTGAACACTGCTCTATCTATGATGGCATATGATTATCCGACAGCGAAGTTGTCGGTCTATGTATCCGATGATGGAGGTTCCAAGCTCACCCTCTTTGCTTTCATGGAGGCTGCTAGGTTTGCTACCCACTGGCTACCTTTTTGTAGGAAGAATAAGGTTGTAGAGAGGTGTCCGGAGGCTTATTTCGGATCCAACCCCTCATCATGGTTTCCAGAGACTGATCAGATTAAGCTGATGTACGAGACCATGAAAATTAAGGTGGAGAGCGTTGTTGAGAAAGGGACCATTCCCCATGATCATTTCACCAATGAGCAGGAAAAACAAGCTTTCAGCAGATGGACTGATGAGTTTACACAAGCAAATCACCCTGCTGTGGTTCAGGTTTGCTTCAATGCAACTCCTAAACTCCTAATCCCATAA 768 0.4701 MANPFQFRPPLHTRVLMRRTSAYRVFAIFYSFAILALLYHHLIHLLHSPNTLSFFILLADVLFSFLWASSQGFHMCPTDRRVFIEHLEHYVKESDYPGLDVLICTADLHKEPPMGVVNTALSMMAYDYPTAKLSVYVSDDGGSKLTLFAFMEAARFATHWLPFCRKNKVVERCPEAYFGSNPSSWFPETDQIKLMYETMKIKVESVVEKGTIPHDHFTNEQEKQAFSRWTDEFTQANHPAVVQVCFNATPKLLIP* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0190 255 Pfam Cellulose synthase 99 247 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0190 255 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 177 IPR029044 -
Vvi2g0190 255 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0190 Vvi-Chr2 1682443 1686253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0190 11 248 Glycosyltransferase AT4G24010 48.954 1.37e-73 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0190 - - vvi:100241114 497.664