Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0188 ATGAACCTTGGTTTAAACATAATCCAAATTGAACTTGATCGAAAAAAACAATATCAAGTTACATCTAGGTTGTGTTGGGCCAACTATCTGATGTACGAGACCATGAAAATTAAGGTGGAGAGTGTTGTTGAGAAAGGGACCATTCCCCATGAACATATCACCAATGAGCAAGAAAAACAAGCTTTCAGCAGATGGACTGATGAGTTTACACAAACAAATCATCCTGCTGTGGTTCAGTTTTGGAAAGTCATTAGAAAGAAAGAGGAGAAGAGAGAAAAACACAGGTTTTTCTCATCATACCCAGATTTCATCAAATGTCCGATCTCGCTTCGTTCGTGGTCGGATCGAGTTGAAATTTGGAGGAGAGGTTCGTGGCTCATGTATCTTCAATATGAACGGTGGAGATTGGATTTGGAGTTTCGGACAGTCATTAGAGAGAAAGAGGAGAAGAGAGAAAAACGCAGGTCTTTTACATCATGCCCAGATTTCATCAAAGGTTCTGTTGGAGGGTGGCAAGGACATGGACATCACTGGCCATACAATACAATGCCCGACCTCGTCCATGTATCCAGAGAGAAAAGGCCCGGTTCACCCCACCATTTCAAGGCTGGTGCCCTTAATGTCCTGATTCGAGTATCGGCCACCATGACCAATGCCCCAGTAGTCCTGACTCTCGACAGCGACATGCACTCAAATGATCCACAAACACTACTTCGCGCACTGTGTTATCTCTTGGACCCTGATATGGATCCAAATCTCGGGTTCGTTCAGTTTCCTCAAACCTTCCATGGGATCAACAAGAATGATATTTAA 813 0.4354 MNLGLNIIQIELDRKKQYQVTSRLCWANYLMYETMKIKVESVVEKGTIPHEHITNEQEKQAFSRWTDEFTQTNHPAVVQFWKVIRKKEEKREKHRFFSSYPDFIKCPISLRSWSDRVEIWRRGSWLMYLQYERWRLDLEFRTVIREKEEKREKRRSFTSCPDFIKGSVGGWQGHGHHWPYNTMPDLVHVSREKRPGSPHHFKAGALNVLIRVSATMTNAPVVLTLDSDMHSNDPQTLLRALCYLLDPDMDPNLGFVQFPQTFHGINKNDI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0188 270 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 30 270 - -
Vvi2g0188 270 Pfam Cellulose synthase 177 269 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0188 270 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 168 270 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0188 Vvi-Chr2 1667929 1673179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0188 30 95 Glycosyltransferase AT4G24010 37.879 1.88e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0188 - - vvi:100853540 184.882