Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0187 ATGAAGGGTTCAACTGAGACCACCACCAGCCATGGCCATCCTCCCCTTCACACCGTAAAGGTCCTCCGGAGAACTCCTCTCAACCGAGTCTTCGCCGCCGTTTACTTGGCTGCAATCTTAGCTCTATTCTACCACCATGCACTCACACTCGTCAGCTCCACCTCCATCTCCTCCTTCCTTATCTGCATCTCCTTTCTCATCGCTGACATCGTTCTCGCCTTCATGTGGTCCACCACCCAGTCCTTCCGCATGCGTCCAGTCCGGCGCCGTGAGTTCCCGGAAAACCTCAAACTAGTCCTCGATAACCCCGGTGAGTTTCCGCGTTTGGACGTCTTCATATGCACTGCGGATCCCTACAAGGAGCCACCACTTGGAGTGGTGAACACCGCCCTTTCAGTGATGGCCTACGAGTATCCGACCGAAAAGATATCGGTTTATGTCTCTGATGATGGAGGGTCTCAGCTCACTCTCTTTGCTTTCATGGAGGCCGCCAAGTTTGCAGCCCACTGGTTGCCCTTTTGTAGGAAGAAGAAGATAGAAGAGAGGTGCCCTGAAGCTTATTTCAGATCCAATTACGCTTGCTGCTCTGAAACTCAGAATATTAAGATGAAATACGAGGTCATGAAACAGAGGATAGAGACAACCATGGAGCAAGGCAAAGTTGGTTATGAGTGGGTCACTAGCGAAGAAGAGCGTGAAGCTTTAAGTAAATGGACCGATAAATTTACACGGCAAGATCATCCTACAGTAATCCAGGTTCTATTAGAAAGTGGCCAAGACCAAGACAGGTCTGGCCGTATGATGCCAAACCTCATCTATGTGTCCAGGCAGAAAAGTAGGGCTTCACCCCACCAGTTTAAGGCTGGTGCCCTGAACACCCTGCTCCGGGTATCAGCTATAATGACCAATGCGCCAATAGTCCTGACCCTGGACTGCGACATGTACTCGAACAACCCAGTGACCCTGCAACATGTGCTATGTTACCTGTCCGATCCGGACATGGACTCGAAATTAGGGTACATCCAGTTTCCTCAGCGTTTTCATGGGCTCAACAAGAATGATATCTATGCTTCTGAGTTTAAACCTTTGTTTGTAACCAATCCGGCCGGGATGGACGGACTGGCCGGCTCTAATTACGTCGGAACCGGGTGCTTTTTCCGTCGCCGGGTTTTCTTTGGAGCTCATTCATCTATGGTATCTCCAGAGATTCCTGAACTGAGCCCTGGCCATGTTGTTGACAAGCCCATCAGGTCCCAAGAAGTTCTAGCATTGGCGCACCATGTAGCAGGCTGCAATTATGAGAACGAGAGCAATTGGGGTTCCAAGGTGGGGTTCAGATATGGGTCACTAGTGGAGGACTATTACACTGGTTATCGTCTGCAGTGTGAGGGATGGAGATCCAGATTCTGCCAGCCTGATAGAGAAGCGTTTCTGGGCGATATACCGATAAGCCTTAATGACGTGCTGAGCCAAAATAAACGATGGTCCATCGGCCTCCTTGAGGTGGCCTTTTCGAAGTATAGTCCTGTAACTTTCGGCACCATGGCCACGGGTCCTCTCCTGGCGCTTTCTTATGCCCATTATGCATTTTGGCCCATTTGGTCTGTCCCCATCACCATATATGGCTTTCTCCCTCAACTTGCCCTTCTCATTAATCTTCCTATATTCCCCAAGGTATCTGACCCATGGTTCATCTTGTACGCATTTCTTTTCCTTGGTGCCTATACACAAGACTTCATAGACTTTGTATTAGCTGGTGGGACAGTCCAAAGGTGGTGGAATGAGCAGAGAATGTGGTTGATAAGGGGAGTAACATCCTACTTATTCGGGTTGGTTGAGTTTTCATTCAAGTGCTTAGGGTTTTCTACATTAGGGTTCAATCTGACCAGCAAGGTAGTCGACGATGAACAAGGGAAGAGGTACGAGCAAGGCACCTTTGAGTTTGGCGTGGCCTCGCCCATGTTTGTGCCACTAACAATGGTGGCCATGGTCAACTTGTTTTCGTTCCTCCGAGGGATTATTGAAATTTCCAGAGGTAGAAGAAGTATAGAAGAGTGGTTCATAGAGATGTTCATTGCTGGTTTTGTGGTGGTGAATTGCTGGCCAATTTATGAGGCCATGGTCATGAGGAAGGATAAAGGGAGAATTCATACCAAAACTACAATTATTTCCGCAGTTTTGGTCTATGCTCTCTACACTGCAGCTTCTTTTACCCTGAAAATTTGA 2226 0.4852 MKGSTETTTSHGHPPLHTVKVLRRTPLNRVFAAVYLAAILALFYHHALTLVSSTSISSFLICISFLIADIVLAFMWSTTQSFRMRPVRRREFPENLKLVLDNPGEFPRLDVFICTADPYKEPPLGVVNTALSVMAYEYPTEKISVYVSDDGGSQLTLFAFMEAAKFAAHWLPFCRKKKIEERCPEAYFRSNYACCSETQNIKMKYEVMKQRIETTMEQGKVGYEWVTSEEEREALSKWTDKFTRQDHPTVIQVLLESGQDQDRSGRMMPNLIYVSRQKSRASPHQFKAGALNTLLRVSAIMTNAPIVLTLDCDMYSNNPVTLQHVLCYLSDPDMDSKLGYIQFPQRFHGLNKNDIYASEFKPLFVTNPAGMDGLAGSNYVGTGCFFRRRVFFGAHSSMVSPEIPELSPGHVVDKPIRSQEVLALAHHVAGCNYENESNWGSKVGFRYGSLVEDYYTGYRLQCEGWRSRFCQPDREAFLGDIPISLNDVLSQNKRWSIGLLEVAFSKYSPVTFGTMATGPLLALSYAHYAFWPIWSVPITIYGFLPQLALLINLPIFPKVSDPWFILYAFLFLGAYTQDFIDFVLAGGTVQRWWNEQRMWLIRGVTSYLFGLVEFSFKCLGFSTLGFNLTSKVVDDEQGKRYEQGTFEFGVASPMFVPLTMVAMVNLFSFLRGIIEISRGRRSIEEWFIEMFIAGFVVVNCWPIYEAMVMRKDKGRIHTKTTIISAVLVYALYTAASFTLKI* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0187 741 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 226 395 IPR029044 -
Vvi2g0187 741 SUPERFAMILY Nucleotide-diphospho-sugar transferases 119 579 IPR029044 -
Vvi2g0187 741 Pfam Cellulose synthase 109 397 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0187 741 Pfam Cellulose synthase 415 726 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vvi2g0187 741 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 17 723 - -
Vvi2g0187 741 FunFam Cellulose synthase-like protein G3 235 393 - -
Vvi2g0187 741 FunFam Cellulose synthase isolog 100 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0187 Vvi-Chr2 1662924 1666932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0187 16 727 Glycosyltransferase AT4G24010 56.084 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0187 - - vvi:100253121 1500.34