Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0174 ATGTTGATCAACTCTGCCATATTCCTCCACTGCATTCTGGTTTCCACCATGTTTCTTCAACCAAAAGCTCGGCAACACCCTCAAGAACCCGAAGAGCTCTTCTCAAACTCCAATGCCAATGCCCCTCCAGTGCCTCCTCGATCATCAGCTTCTTCATCATTGGTGACTTCTCCTTCAGCCTCAGCTTCTTCTTCTTCTCCTCTGGTTCCAGCCTTCTTCATCATTGGTGACTCCTCTGTGGACTGCGGCAACAACAACTTCCTCGGCACCTTGGCTCGCGCGGATCACCTTCCGTATGGAAGAGATTTTGACACCCACAAGCCCACCGGGAGGTTCTGCAATGGAAGAATCCCAGTTGATTATCTTGCATTACGCCTTGGTCTTCCTTTTGTACCAAGTTATCTGGGGCAATCTGGAGTGGTAGAAGATATGATTCATGGAGTGAATTATGCCTCTGCTGGTGCTGGAATCATTTTCTCGAGCGGATCAGAACTGGGTCAGCACATCTCCTTCACACAGCAGATTGAGCAGGTTACAGACACATTTCAGCAGTTCATACTGAGCCTGGGAGAGGCTGCAGCGAACGACCTAATCTCGAATTCGTTGTTCTACATCTCAATCGGGATCAATGACTACATACATTACTATCTGCTCAATATGTCGAATGTTCAAAATCTTTACCTGCCATGGAGTTTCAACCAGTTCTTGGCAACCACAGTAAAGCAAGAAATCATGAACTTGTACAATGCGAATGTTCGAAAAGTGGTGGTGATGGGGTTGGCACCTATAGGCTGTTCTCCCTACTACCTGTGGCTGTATGGAAGCCAGAATGGGGAGTGTGTGAAGGAGATAAACGATATGATAATGGAGTTCAACTTTGTGATGAGATACATGCTTGAGGAACTTGGTGAGGAGCTCCATGACGCCAACATCATCTTCTGTGATGTGTTTGAAGGTTCAATGGATATACTAAAGAACTACAAGCGCTATGGTGAGATCATTTAA 1005 0.4627 MLINSAIFLHCILVSTMFLQPKARQHPQEPEELFSNSNANAPPVPPRSSASSSLVTSPSASASSSSPLVPAFFIIGDSSVDCGNNNFLGTLARADHLPYGRDFDTHKPTGRFCNGRIPVDYLALRLGLPFVPSYLGQSGVVEDMIHGVNYASAGAGIIFSSGSELGQHISFTQQIEQVTDTFQQFILSLGEAAANDLISNSLFYISIGINDYIHYYLLNMSNVQNLYLPWSFNQFLATTVKQEIMNLYNANVRKVVVMGLAPIGCSPYYLWLYGSQNGECVKEINDMIMEFNFVMRYMLEELGEELHDANIIFCDVFEGSMDILKNYKRYGEII* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0174 334 CDD SGNH_plant_lipase_like 70 331 IPR035669 -
Vvi2g0174 334 Gene3D SGNH hydrolase 59 333 IPR036514 -
Vvi2g0174 334 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 70 331 - -
Vvi2g0174 334 Pfam GDSL-like Lipase/Acylhydrolase 73 325 IPR001087 GO:0016788
Vvi2g0174 334 SUPERFAMILY SGNH hydrolase 72 318 - -
Vvi2g0174 334 MobiDBLite consensus disorder prediction 24 66 - -
Vvi2g0174 334 MobiDBLite consensus disorder prediction 30 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0174 Vvi-Chr2 1573935 1575785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0174 42 331 Acyl Lipid Metabolism Gene Families AT4G10950 68.276 2.77e-150 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0174 - - vvi:100244404 608.601