Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0171 ATGGTCAAACCACAGAGGCCACCCTCTGGCCGTACGAATCTAGCTTCATGCGTTGTGGCCACAATATTCTTGATTTTCATCATCATCGTTGTGTTGATCGTCTTCTTCTCTGTGTTCAAGCCCAAAGAACCCATAATTTCAGTGAATGCAGTGCAGCTTCCGAGCTTCGCAATCTCCAATGGCACCGTCAACTTCACATTCTCGCAGTACGTGTCGGTGAAGAACCCTAACAAGGCGGAGTTCTCGCATTACGACAGCACGCTTCAGCTGCTCTACGGTGGGAATCAAGTGGGCTTCATGTTCATTCCCGCCGGGAAGATCGGCTCCGGCCGGACCCAGTACATGGCTGCCACCTTCGCGGTGGAGTCGTTCCCATTGGGGGCGGTGCCGGAGTCCGTGGGACCCACGATCACCGACGGCCTCGGAGGGTTCAGAATCGGACCCAATTTGGAGATTGAGTCGAGGATGGAAATGGCGGGCAGGGTTAGGGTTTTGCACTTCTTCACGCACCATGTGGATGCGAGAGCTGTTTGTAGGGTTTCCATTGCTGTGAGTGATGGATCTGTTTTAGGGTTTCACTGCTAG 585 0.535 MVKPQRPPSGRTNLASCVVATIFLIFIIIVVLIVFFSVFKPKEPIISVNAVQLPSFAISNGTVNFTFSQYVSVKNPNKAEFSHYDSTLQLLYGGNQVGFMFIPAGKIGSGRTQYMAATFAVESFPLGAVPESVGPTITDGLGGFRIGPNLEIESRMEMAGRVRVLHFFTHHVDARAVCRVSIAVSDGSVLGFHC* 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0171 194 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 194 - -
Vvi2g0171 194 Pfam Late embryogenesis abundant protein 71 175 IPR004864 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi2g0171 Vvi-Chr2 1539462 1540046 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0171 - - vvi:100244412 370.548