Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0170 ATGCCATCTGAGAGGGAAAATTTCAACCTTTCAGGACCATTACACCTGACTACTGTTGACTGGAAGAATACGCACCATCAAAGATCTGTGGCTGCGAGTTTGGTTCAGGGTGTCTACATTCTAGAGCGGGACCGCCAGGAAAAACGTCAAGGGTCCCAAGCTCTTGCCCCTCCTTGGTGGGAGTTCTTTCAATTTCAGATAGTTCTCCAGCTTGTGGATGATGCTGATTCCTGTATTTTTGGTGCCATCTATAAATTCACACCCCAAGCGTCACCTGGTACTCTCTCAACAAATGAAAGTCCACATTATGTCATTGCCTTCCGTGGCACCATTAGGAAGCCACATTCTGTCTCACAGGACTTGAAGTTGGACCTCCAGCTCCTCCAAAATGGACTTCACCGGACATCTCGTTTTGAGATTGCAATGCAGGCTGTCCGGAACATGGTGGCTGCAACCCAAGAAAATAATATCTGGTTAGCTGGCCATTCCCTGGGTTCAGCCATGGCAATGCTTGCTGGAAAGAATATGGCTAAGATGGGCATTTTTCTTGAAGCTTTTCTCTTTAATCCACCATACGTCTCAGCCCCAATTGAGAGAATTAAGGATAAAAAAGTGAAACAAGGGATCAGAATTGCGAGCAGTTTGATCACAGCAGGGCTAGCTGTTGCTGTGAAAGGTACCCACCAAAGGAACCAGTTTGAAGATCAATTTGTGGCTTTGTCTACTTGGGTTCCATCTTTGTTTGTTAATCCAGCTGATCACATCTGCTCCGAATATATCGGGTATTTCAAACACAGGAAAAAAATGAAGGACATTGGAGCAGGAGGCATTGAGAGGTTGGCTACCCAGAACTCAATCCATGGTCTATTTATGACTGCAATAGGAAAGGAGTCAGAACCACCACTTCACCTCATTCCTTCAGCAGTTCTAACAATTAATTCAATTCCTTCCCCAGATTTCAAACATGCCCATGGAATTCACCAGTGGTGGGGACCTGAACTGTACTTGAAATCCAAACTTTACAAATACAGTTAA 1035 0.4473 MPSERENFNLSGPLHLTTVDWKNTHHQRSVAASLVQGVYILERDRQEKRQGSQALAPPWWEFFQFQIVLQLVDDADSCIFGAIYKFTPQASPGTLSTNESPHYVIAFRGTIRKPHSVSQDLKLDLQLLQNGLHRTSRFEIAMQAVRNMVAATQENNIWLAGHSLGSAMAMLAGKNMAKMGIFLEAFLFNPPYVSAPIERIKDKKVKQGIRIASSLITAGLAVAVKGTHQRNQFEDQFVALSTWVPSLFVNPADHICSEYIGYFKHRKKMKDIGAGGIERLATQNSIHGLFMTAIGKESEPPLHLIPSAVLTINSIPSPDFKHAHGIHQWWGPELYLKSKLYKYS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0170 344 Pfam Lipase (class 3) 141 181 IPR002921 GO:0006629
Vvi2g0170 344 SUPERFAMILY alpha/beta-Hydrolases 14 202 IPR029058 -
Vvi2g0170 344 Gene3D alpha/beta hydrolase 60 207 IPR029058 -
Vvi2g0170 344 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0170 Vvi-Chr2 1534170 1535552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0170 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 54.737 7.72e-114 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0170 - - vvi:100266730 688.723