Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0169 ATGGCGAAAACCATTCTGATCACCGGCGGTGCCGGATACATTGGCAGCCACACCGTTCTTCAGCTTCTGTTGGGCGGATTCAGGGCGGTCGTCGTTGACAACCTCGACAACTCCTCCGAAATCGCCATTCACCGCGTTAAAGAACTGGCTGCTGAGTTCGGCGACAACCTCGTCTTCCACAAGTTGGATCTAAGGGACAAACAAGCGCTTGAACAACTTTTTGCCTCAACAAATTTTGATGCTGTCATTCACTTTGCTGGGTTGAAGGCAGTTGGTGAAAGTGTGCAAAAACCATTGCTTTACTATGATAACAACCTTATTGGCACAATTACTCTATTGGAAGTCATGGCTGCCCATGGATGCAAAAAGCTTGTTTTTTCATCATCAGCTACTGTTTATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAGTTCCCGCTATGTGCTGCAAATCCATATGGACGAACCAAGCTTGTTATTGAAGATATATGCCGTGATATTTACGGTTCAGATTCTGAATGGAAAATAGTGTTGCTGAGATACTTCAACCCGGTTGGTGCACATTCTAGTGGCCATATTGGTGAGGATCCTCGTGGAATCCCAAACAACCTTATGCCCTTTGTGCAGCAAGTTGCTGTTGGCAGGCGACCTGCACTTACAGTTTTTGGAAGTGACTATTCAACAAAGGATGGTACCGGGGTCCGTGATTACATCCATGTTGTTGATTTGGCAGATGGGCACATTGCAGCTTTGTGCAAGCTATTCAACTCAGAAATAGGCTGTGAAGTGTACAACTTGGGAACAGGAAAAGGAACATCGGTTTTGGAGATGGTTGCAGCATTTGAGAAGGCATCTGGAAAGAAAATTCCTCTAGTCATGGCCGGACGAAGACCTGGTGATGCTGAGATTGTTTATGCATCGACAGCCAAAGCAGAAAAAGAGTTAAACTGGAAGGCCAAGTATGGCATCAGCGAGATGTGTCGGGACCAATGGAATTGGGCCAGCAAGAACCCCTATGGCTACGAATCGTCCCCAACACAAGACTAA 1047 0.4642 MAKTILITGGAGYIGSHTVLQLLLGGFRAVVVDNLDNSSEIAIHRVKELAAEFGDNLVFHKLDLRDKQALEQLFASTNFDAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLCAANPYGRTKLVIEDICRDIYGSDSEWKIVLLRYFNPVGAHSSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVRDYIHVVDLADGHIAALCKLFNSEIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEIVYASTAKAEKELNWKAKYGISEMCRDQWNWASKNPYGYESSPTQD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0169 348 Gene3D - 5 274 - -
Vvi2g0169 348 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 343 - -
Vvi2g0169 348 FunFam UDP-glucose 4-epimerase 4 277 344 - -
Vvi2g0169 348 Gene3D - 193 334 - -
Vvi2g0169 348 Pfam GDP-mannose 4,6 dehydratase 6 329 IPR016040 -
Vvi2g0169 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
Vvi2g0169 348 FunFam UDP-glucose 4-epimerase 5 198 - -
Vvi2g0169 348 CDD UDP_G4E_1_SDR_e 4 333 IPR005886 GO:0003978|GO:0006012
Vvi2g0169 348 NCBIfam UDP-glucose 4-epimerase GalE 5 339 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0169 Vvi-Chr2 1522127 1527477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0169 4 318 Miscellaneous Gene Families AT4G00110 26.586 2.61e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0169 K01784 - vvi:100261533 707.983