Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0167 ATGGCGCAGACCATATTGGTCACCGGCGGTGCCGGATACATTGGCAGCCACACCGTTCTTCAGCTGCTGTTGGGCGGATTCAGGGCGGTAGTCGTCGACAACCTGGACAACTCCTCCGAAATCTCCATTCACCGTGTTAAAAAACTTGCTGCTGAGTTCGGCGACAACCTCCTTTTCCACAAGTTGGATCTACGGGACAAACCAGCGCTTGAACAACTTTTTGCCTCAACAAATTTTGATGCTGTCATTCACTTTGCTGGGTTGAAGGCAGTTGGTGAAAGTGTGCAAAAACCCTTGCTTTACTTTGATAACAACCTTATTGGCACAATTACTCTATTGGAAGTCATGGCTGCCCATGGATGCAAAAAGCTTGTTTTTTCATCATCAGCTACTGTTTATGGTTGGCCAAAGGAGGTTCCATGTACAGAAGAGTTCCCACTATGTGCAACAAATCCATATGGACGAACTAAGCTTTTCATTGAAGATATATGCCGTGATATCCACCGCTCTGATTCTGAATGGAAAATTGTGTTGCTGAGATATTTCAACCCAGTTGGGGCACATCCTAGTGGCTATATTGGTGAGGATCCTCGCGGAATCCCAAACAACCTTATGCCCTTTGTGCAGCAAGTTGCTGTTGGCAGGCGACCTGCACTTACAGTTTTTGGAAGTGACTATTCAACAAAGGATGGTACTGGGGTACGGGATTACATTCATGTTGTGGATTTAGCAGATGGGCACATTGCAGCCTTGCACAAGCTACTCAACTCAGAAATAGGGTGTGAAGTGTACAACTTGGGAACTGGGAAAGGAACTTCAGTTTTGGAGATGGTTGCAGCATTTGAGAAGGCATCTGGAAAGAAAATTCCTCTGGTCATGGATGGACGGAGACCTGGTGATGCTGAGATTGTTTATGCATCAACAACCAAAGCAGAAAAGGAGTTGAACTGGAAGGCAAAGTACGGGATCAGTGAGATGTGTCGGGACCAGTGGAACTGGGCCAGCAAGAACCCATATGGCTACGAATCATCCCCAACAACAGACTAA 1047 0.4642 MAQTILVTGGAGYIGSHTVLQLLLGGFRAVVVDNLDNSSEISIHRVKKLAAEFGDNLLFHKLDLRDKPALEQLFASTNFDAVIHFAGLKAVGESVQKPLLYFDNNLIGTITLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLFIEDICRDIHRSDSEWKIVLLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVRDYIHVVDLADGHIAALHKLLNSEIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMDGRRPGDAEIVYASTTKAEKELNWKAKYGISEMCRDQWNWASKNPYGYESSPTTD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0167 348 Gene3D - 193 334 - -
Vvi2g0167 348 Gene3D - 5 274 - -
Vvi2g0167 348 Pfam GDP-mannose 4,6 dehydratase 6 329 IPR016040 -
Vvi2g0167 348 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 343 - -
Vvi2g0167 348 NCBIfam UDP-glucose 4-epimerase GalE 5 339 IPR005886 GO:0003978|GO:0006012
Vvi2g0167 348 FunFam UDP-glucose 4-epimerase 4 277 344 - -
Vvi2g0167 348 FunFam UDP-glucose 4-epimerase 5 198 - -
Vvi2g0167 348 CDD UDP_G4E_1_SDR_e 4 333 IPR005886 GO:0003978|GO:0006012
Vvi2g0167 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 341 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0167 Vvi-Chr2 1500998 1506060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0167 4 333 Miscellaneous Gene Families AT3G23820 27.168 1.75e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0167 K01784 - vvi:100251292 705.671