Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0160 ATGGATGATGGTCTTGGAAAGATAGAGGTTTTCCCCGATCATTTTCATGCTTCGATGCCCATTGCAGAGTCTGTTGAAAAGAAAAATCAATCTTTTTCTCATTCAAGAACTGATAACTCTTTTAGTTCCCATAGTCGCTCGTGGGCTCGAAGAAAATTGAGAAGTGCTGCATCAATGTTGAACTTGTTTAGCCTACGGGGGTTGCCATGGGGATCAAGCAGTGATGATCAGGAAAAGGTTGAGTTAACTGTTGCAGAATTAGAATCTCTTCGAACAGAACTTGCTAGTTTGGAAGAGAGAGAAGCTCACTTTAAAGCTCAGTTGGAACATGTTGATGAAATTTTGCGGTCCGCACGTCTATCTGGCTACTTGTACATTCGAACTAGGTGGGCAGCTTTACCAGGAGAACCTCCTCCCATTGATGATACTGAAGTTGACGACTGGCTTCCCCGCTTTGTTGTGCTTCATGGCTCATGTTTATTCTTCTATATGCTGTCTACAGAATGTCATGCAGATTTGAGTCCTCAGGACTCTACCCTACTTTCTGATGTTACTGAAGTCGGTCCTCTGCCAAACTTGACACGAGAAGACAAGGAGATTCGATATTGCTTTTATATCTTAACTTCTCATGGATTGCGATATGAGTGCTCAAGTGTTTCAAAAGTACAGGTGGACTCTTGGCTGACGGCATTAAGACTCGACTGCAAAATCGAACCCGAACCCAAACCCGAACCCGAGAACATAGCCCCTCAATAA 756 0.4352 MDDGLGKIEVFPDHFHASMPIAESVEKKNQSFSHSRTDNSFSSHSRSWARRKLRSAASMLNLFSLRGLPWGSSSDDQEKVELTVAELESLRTELASLEEREAHFKAQLEHVDEILRSARLSGYLYIRTRWAALPGEPPPIDDTEVDDWLPRFVVLHGSCLFFYMLSTECHADLSPQDSTLLSDVTEVGPLPNLTREDKEIRYCFYILTSHGLRYECSSVSKVQVDSWLTALRLDCKIEPEPKPEPENIAPQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0160 251 SMART PH_update 118 238 IPR001849 -
Vvi2g0160 251 Pfam PH domain 121 232 IPR001849 -
Vvi2g0160 251 Coils Coil 80 107 - -
Vvi2g0160 251 SUPERFAMILY PH domain-like 145 243 - -
Vvi2g0160 251 ProSiteProfiles PH domain profile. 117 236 IPR001849 -
Vvi2g0160 251 Gene3D - 102 234 IPR011993 -
Vvi2g0160 251 PANTHER OS05G0595500 PROTEIN 1 244 - -
Vvi2g0160 251 CDD PH 120 231 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0160 - K00940 vri:117931167 475.322