Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0153 ATGGCATATCGGCGAAGCGTCATCACTAGAGGAGGTTTTCTCGCTCGGCGAATCCACCCGTCCTTTGGTTACATTAGTCATGATGAAGATCGGAAACAACGTTCTGCTGACTCCTATCAATCTCCACAGAGAATTAGTGACTTCCTTCTGCGGAGGTCATTTGGAAGCAAAATCAACACTTCTGGAGGGTTTGGTGCCTTCTTTCAAGGGAAAGGTTTTTCTCCATTGTCTCATCAAGTGGCAGTTGGATCCTCGTACAGTAGGTATATGTCTACTGCAATTGGAGAAGGGTCAGAAAATATAGGAGTTATTGCAGAGACACCCGTGGACTTGATTGCAAATGCAACTGTGGATGTTGCATCAGAAGTCAGCATCGCTGCTGCAGATTCTTTCTTCCTTGTTGGGATCCTGCAGCATTTAATTGGTGGTGTTCATTCTTATACTGGCTTGAGCTGGGCAGCTTCCATAGCTCTAACCACTCTTTTGATTCGAGGGATGACAGTTCCGCTTCTAGTAAATCAACTGAAATCCACTTCTAAACTAACTTTGATGAGGCCACACTTGGAGGCTATAAGGGAAGAGATGCAAGCTAAGGGCATGGAACCTAGTGCAGTGGCTGAAGGTAACAAACGAATGCAGCAAATATTTAAAGAGTACGGGGTGACTCCTTTCACTCCATTGAAGGGACTCATTATCCAAGGTCCTGTCTTCGTCAGTTTTTTTCTTGGTATTTCAAACATGGTACAAAAGGTCCCATCTTTTAAAACTGGAGGAGCATTATGGTTTACCGATCTAACAACTCCAGATAGTTTTTACATCATGCCAATTTTGGCGGGATTGACATTCTTGATAACAGTGGAGTTCAACATGCAAGATGGTATGCAAGGAAATCCTACTGCTGGCACCATGAAGAAATTCTCCAGGGCCCTTGCTTTTCTTTCAGTTCCATTTACCATGAATTTTGCTCAGGGTATATTTTGTTATTGGATTCCCTCCAATTTGTTCTCACTCGCCTATGGATTTGCTGTTAAACAACCTGCGGTGAAGAAGATGTTTGGTATCCCTGAAATACCTGTTCCACCACCTCCTGCTAAAACCAGTCCCAGCACTTCCTTCTCTTTATCACAAGCACTAAAAAATTTCAAAGCGTTAATGCCGAAAGGCCCTTCATCGCCACCGTTACTGCCGCCTTCATCGCCACGTTCATCACCTGCTCAGTCACTAGTTCAACCCTCAAAGTTTGAAGGCAAACCAATATCTTCAACAGCAGTTCTAAGTCAGAGGATTAGAAGTTTAGAAAAACAAGTGAAGGGAAGAAAGAAAAATAAAAAGAGGTGA 1338 0.4335 MAYRRSVITRGGFLARRIHPSFGYISHDEDRKQRSADSYQSPQRISDFLLRRSFGSKINTSGGFGAFFQGKGFSPLSHQVAVGSSYSRYMSTAIGEGSENIGVIAETPVDLIANATVDVASEVSIAAADSFFLVGILQHLIGGVHSYTGLSWAASIALTTLLIRGMTVPLLVNQLKSTSKLTLMRPHLEAIREEMQAKGMEPSAVAEGNKRMQQIFKEYGVTPFTPLKGLIIQGPVFVSFFLGISNMVQKVPSFKTGGALWFTDLTTPDSFYIMPILAGLTFLITVEFNMQDGMQGNPTAGTMKKFSRALAFLSVPFTMNFAQGIFCYWIPSNLFSLAYGFAVKQPAVKKMFGIPEIPVPPPPAKTSPSTSFSLSQALKNFKALMPKGPSSPPLLPPSSPRSSPAQSLVQPSKFEGKPISSTAVLSQRIRSLEKQVKGRKKNKKR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0153 445 Pfam 60Kd inner membrane protein 152 343 IPR028055 -
Vvi2g0153 445 CDD 5TM_Oxa1-like 149 346 - -
Vvi2g0153 445 MobiDBLite consensus disorder prediction 385 420 - -
Vvi2g0153 445 NCBIfam membrane protein insertase YidC 151 339 IPR028055 -
Vvi2g0153 445 MobiDBLite consensus disorder prediction 401 420 - -
Vvi2g0153 445 PANTHER OXA1 115 435 IPR001708 GO:0016020|GO:0032977
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0153 K03217 - vvi:100266802 793.497