Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0152 ATGGCGCAGAAGAGGTTCATCATAGAGATGGAGAAGGCGAAGGAGGCAAAGGACGGGAGGCCGTCGATCGGACCGGTGTACCGGAGTTCCTTCGCCAGGGATGGATTTCCGAAGCCGATTGAGGGAATGGAGAGCTGCTGGGACGTTTTCCGCCTGGCTGTTGAAAAATATCCTGGAAATCGCATGCTTGGTCAACGAGAGATTGTGAATGGGAAGGCTGGTAAATATGTGTGGCTAACTTATAAAGAAGTATATGACAAAGTGATGAAAGTTGGAAATTCCATCCGCAGTTGTGGTGTTAATGAAGGAGGACGATGTGGTATCTATGGTGCTAATTCTGCTGAGTGGATCATGAGCATGGAGGCGTGCAATGCTCATGGGCTCTATTGCGTTCCTTTATATGATACCCTAGGTGCCGGTGCCGTGGAATTTATCATATGCCATTCAGAGCTGTCAATTGTTTTCGTAGAAGAAAAAAAGATTCCTGAGGTGTTGAAAACATTTCCTAACACAACTGAATACTTGAAAACAATTGTGAGCTTTGGCAAGGTTACACCTGAACAAAGGGAAGAAGTTGAAAAGTTTGGTTTGGCCATATATTATTGGGAGGAATTCTTGCAACTGGGAGATGATAAAAAATTTGATCTTCCATTGACAAAGAAAAACGACATTTGTACAATAATGTACACAAGTGGAACAACCGGTGACCCCAAAGGTGTGATGATTTCCAATGAAAGCATTGTTACTCTTATTGCTGGGGTGAAGCGCCTGCTACAGAGTGTCAATGAAGAGTTGAATGAGAAGGATGTATTTATTTCATATCTTCCTCTAGCACATATCTTTGATCGGGTGATTGAAGAGTTATTTATTTCTCATGGTGCCTCAATAGGATTTTGGCGAGGGGATGTCAAATTATTGGTTGAAGACATTGGGGAGCTAAAACCGACTATTTTCTGTGCTGTTCCTCGCGTATTAGATAGGATATATTCAGGTTTGAAACAGAAGATTTCTGCAGGTGGTTTATTGAGAAATACACTGTTCAACATTGCATACAAGTACAAACAATACAACCTGTGGAAGGGGGTTAAAACCCTAGAGGCAGCTCCTATTTGTGATAAAATAGTCTTTGGCAAGGTAAAGCAAGGTTTAGGTGGAAACGTACGACTTATTTTATCTGGAGCCGCACCACTCTCTACCCATGTGGAAGCTTATCTACGAGTGGTGACTTGTGCTCATGTTCTACAAGGATATGGTCTGACTGAAACTTGTGCGGGCACATTTGTCTCACTGCCAAATGAAATTAGCATGCTTGGTACAGTGGGCCCTCCAGTACCAAATGTTGACGTATGCCTAGAATCTGTTCCTGAAATGGGATATGATGCCCTCTCAAGCACACCACGTGGAGAAATATGCATACGAGGGAAAACCTTGTTCTCGGGATACTATAAACGTGAAGATCTCACCAAAGAGGTCTTGGTTGATGGATGGTTCCACACAGGGGATGTTGGTGAGTGGCAACCTGATGGGAGCATGAAAATTATCGACCGCAAGAAGAACATATTCAAGCTTTCACAAGGAGAATACGTTGCCGTTGAGAACTTGGAAAACATTTATGGTCTTGTTTCTGATATTGACTCGATATGGATTTACGGCAACAGCTTTGAGTCCTTCCTTGTTGCTGTTGCTAACCCCAATCAGCAAGCACTTGAACGGTGGGCTAAAGAGAACAATATTTCTGGGGATTTTGATTCCCTTTGTGAAAATCCCAAGGCAAAAGAATACATACTTGGAGAGCTCTCAAAGATTGGGAAGGAGAAAAAGTTGAAAGGTTTTGAGTTTGTCAAAGCAGTTCACCTTGACCCTGTGCCATTTGATATGGAACGTGACCTGATCACTCCAACATATAAGAAGAAGAGGCCCCAGTTGCTAAAATATTATCAGAATGTTATTGACAAAATGTACAAAAGCATAAACAAGCCCAGTGCCTGA 1989 0.4263 MAQKRFIIEMEKAKEAKDGRPSIGPVYRSSFARDGFPKPIEGMESCWDVFRLAVEKYPGNRMLGQREIVNGKAGKYVWLTYKEVYDKVMKVGNSIRSCGVNEGGRCGIYGANSAEWIMSMEACNAHGLYCVPLYDTLGAGAVEFIICHSELSIVFVEEKKIPEVLKTFPNTTEYLKTIVSFGKVTPEQREEVEKFGLAIYYWEEFLQLGDDKKFDLPLTKKNDICTIMYTSGTTGDPKGVMISNESIVTLIAGVKRLLQSVNEELNEKDVFISYLPLAHIFDRVIEELFISHGASIGFWRGDVKLLVEDIGELKPTIFCAVPRVLDRIYSGLKQKISAGGLLRNTLFNIAYKYKQYNLWKGVKTLEAAPICDKIVFGKVKQGLGGNVRLILSGAAPLSTHVEAYLRVVTCAHVLQGYGLTETCAGTFVSLPNEISMLGTVGPPVPNVDVCLESVPEMGYDALSSTPRGEICIRGKTLFSGYYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYGLVSDIDSIWIYGNSFESFLVAVANPNQQALERWAKENNISGDFDSLCENPKAKEYILGELSKIGKEKKLKGFEFVKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVIDKMYKSINKPSA* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0152 662 Gene3D - 41 516 IPR042099 -
Vvi2g0152 662 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
Vvi2g0152 662 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Vvi2g0152 662 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 18 654 - -
Vvi2g0152 662 Pfam AMP-binding enzyme 65 524 IPR000873 -
Vvi2g0152 662 SUPERFAMILY Acetyl-CoA synthetase-like 44 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0152 Vvi-Chr2 1350077 1359034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0152 3 658 Acyl Lipid Metabolism Gene Families AT4G23850 76.829 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0152 K01897 - vvi:100265062 1345.49