Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0145 ATGATTGCCATGATGAGCGGCTATGGATGCATCAAGATGGAGGACGAGTACATCCGCAGACACCACAGGCATGAGATCAGAGACAACCAGTGCAGCTCCTCTCTCGTCAAGCACATCAAAGCTCCTGTTCATCTGGTTTGGTCTTTGGTGAGGAGTTTTGATCAGCCACAGAAATACAAACCTTTTGTGAGTAGATGCATTGTTCAGGGTGACCTTGAGATTGGGAGTGTTAGGGAAGTGAATGTTAAGTCGGGGCTTCCTGCAACGACTAGCACTGAGAGATTGGAGCTTCTAGATGACGAGGAGCATATCTTCGGCATGAGGATTGTTGGCGGGGATCACAGGCTAAAGAATTACTCGTCCATTGTTACTGTCCATCCTGAGATTATAGATGGGAGACCAGGGACACTAGTGATCGAATCATTTGTGGTAGATGTGCCCGATGGAAACACCAAGGATGAAACATGCTACTTCGTAGAAGCCTTGATCAAGTGCAACCTGAAGTCATTGGCTGATGTGTCAGAGCGATTGGCAATACAGGACCGGACAGAACCCATTGACAGAATGTAA 570 0.4737 MIAMMSGYGCIKMEDEYIRRHHRHEIRDNQCSSSLVKHIKAPVHLVWSLVRSFDQPQKYKPFVSRCIVQGDLEIGSVREVNVKSGLPATTSTERLELLDDEEHIFGMRIVGGDHRLKNYSSIVTVHPEIIDGRPGTLVIESFVVDVPDGNTKDETCYFVEALIKCNLKSLADVSERLAIQDRTEPIDRM* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0145 189 FunFam Abscisic acid receptor PYL9 5 184 - -
Vvi2g0145 189 CDD PYR_PYL_RCAR_like 31 175 - -
Vvi2g0145 189 Gene3D - 5 184 IPR023393 -
Vvi2g0145 189 Pfam Polyketide cyclase / dehydrase and lipid transport 32 175 IPR019587 -
Vvi2g0145 189 SUPERFAMILY Bet v1-like 31 173 - -
Vvi2g0145 189 PANTHER - 29 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0145 Vvi-Chr2 1261463 1263545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0145 K14496 - vvi:100852686 377.481