Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0137 ATGGAGAGCAGTTGCAAAAAGGTCTGTGTAACAGGAGGTTCTGGTTATATAGGCTCTTGGCTGGTAAAGAAGCTATTGGAGAAAGGCCATACTGTCCATGCAACACTAAGAAACTTGGGTGACACCTCCAAAGTAAGCTTTCTCAAGTCTCTTCCTAATGCAGACGCGAGGCTTGTGTTATTTCAAGCTGATATCTACAATCCTGATGAGTTTGAGCTGGCAATCAAAGGCTGTGAATTTGTTTTCCATGTCGCTACTCCCATGCTCCATAGCCCCCAAAGTACACAGTACAAAGACACCACTGAAGCTGCAGTTGCTGGGGTGAAAAGTATAGCTGATTCCTGCGTTCGATCACAAACCGTCAAGAGACTAATCTACACAGCATCTGTCATGGCCTCATCTCCATTGAAAGAAGATGGGTTCGGCTTTAAGTCTTGTTTGGATGAGTCCTGTTGGACACCCCTCAATCTCTCATACCAGCATAGCAATGACGTAATGATGGCATATGTGAAATCAAAGACACTAGCAGAGAAGGAGGTGTTGAGCTATAATGTAGATGAAAATAGTGATCAATTAGAAGTGGTTACCCTTGCTTGTGGCCTAGTTGCAGGAGGGACACTTCAGAACTATCCTTCAACAAGCATAGGATGTGTTTTATCACAGCTTACAGGCAATTTAATTCTTTATGAAGGACTAAGGTTTCTGCAAGAAATGCTTGGTACAATTCCTCTTATACACATCGATGATGTCTGTGAAGCACACATCTTCTGCATGGAAAAACCAGTGATGAAAGGCAGATTTCTGTGTTCAGCTGTCAATGCCACCATCAATGAGATCGCAGACTTCTACTGCGAAAATTATCCGGAATTCAAGATAACAGAAGAGTTCACAGGAGGGGTGGAGGGGCCAACCTGCAAATGGGATTATACAAAGCTGGTGAAGGAGGGTTTTGAGTATAAATATGAGTTGAAGAAGATAGTAGATGATAGTGTGGAGACTGGGAGGCGGCTAGGAGTCTTCTCTGAGTAA 1029 0.4344 MESSCKKVCVTGGSGYIGSWLVKKLLEKGHTVHATLRNLGDTSKVSFLKSLPNADARLVLFQADIYNPDEFELAIKGCEFVFHVATPMLHSPQSTQYKDTTEAAVAGVKSIADSCVRSQTVKRLIYTASVMASSPLKEDGFGFKSCLDESCWTPLNLSYQHSNDVMMAYVKSKTLAEKEVLSYNVDENSDQLEVVTLACGLVAGGTLQNYPSTSIGCVLSQLTGNLILYEGLRFLQEMLGTIPLIHIDDVCEAHIFCMEKPVMKGRFLCSAVNATINEIADFYCENYPEFKITEEFTGGVEGPTCKWDYTKLVKEGFEYKYELKKIVDDSVETGRRLGVFSE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0137 342 Gene3D - 1 342 - -
Vvi2g0137 342 Pfam NAD dependent epimerase/dehydratase family 8 262 IPR001509 -
Vvi2g0137 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 332 IPR036291 -
Vvi2g0137 342 CDD FR_SDR_e 8 317 - -
Vvi2g0137 342 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 330 - -
Vvi2g0137 342 FunFam Anthocyanidin reductase ((2S)-flavan-3-ol-forming) 6 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0137 Vvi-Chr2 1222077 1223492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0137 2 337 Miscellaneous Gene Families AT4G27250 33.618 1.38e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0137 - - vvi:100241597 695.271