Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0136 ATGGCGAGAGATTGGCAACGGGCTCAGTCGATGGAACACTGGCCATCTTCGATTCAATCGACCCAGCTTCTTCATCCTTCACTTGCACCTCCAGATCTAGGGTTCGTGCATGAGGATAGCGTAGTGAAAGTGGTTTGGGTCCCTCCGGAATATGGCGATGCAGTTGGGTGCATTTGTGCTGATGGAACTTTGTCATTGTGGGAGGAGGTTGTAGAAGATGCACAACCCCTTCAATGGAAACTATGCAAAAGTTTTGGAAGTAATTCAAATAAAGTGCTCGATGTCCAATTTGGAGTCTCACCAACAAGTTTGAAAATGGTTAGTGCATATTCAGATGGCCACGTGAAAGTCTATGAGCTCCTAGATCCATTGGAACTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGCTAGTGATTCAGTGTCTACGTTTGGGAAGGCTTTGTGCTTATCTGCATCTGTCTCTTGGAATCCACAAAGAGGTGAAAGTCAGCAATCAAGCTTTGTCTTGGGTTTTCATTCTGACACTCCGCAACTCAATTCCGCAAAGGTCTGGGAATTTGATCAGAATCACCAAAGATGGCTTCCAGTTGCTGAGTTGGCTTTGCATGGGGATAAGGGGGATCAGGTCTTCACTGTTGCATGGGCACCTAATATTGGCAGGCCATATGAGGTAATGGCTGTTGCAACTCACAAGGGAATCGCGATATGGCATCTTGGGCTTAACCCTGACATTGATGGAAGGCTCTCAGTGGAGAGGGTTGCCCTGCTTTCTGGTCATGATGGGGAGGTGTGGCAGATGGAATGGGACATGAGCGGAATGACCTTGGCAACTACTGGAGGAGATGGGATGGTAAGGCTGTGGCAGTCTAACTTGAATGGTGTTTGGCATGAACAGGCTGCACTGGAGCCCACTTCTTAG 924 0.4773 MARDWQRAQSMEHWPSSIQSTQLLHPSLAPPDLGFVHEDSVVKVVWVPPEYGDAVGCICADGTLSLWEEVVEDAQPLQWKLCKSFGSNSNKVLDVQFGVSPTSLKMVSAYSDGHVKVYELLDPLELKSWQLQAEFQNASDSVSTFGKALCLSASVSWNPQRGESQQSSFVLGFHSDTPQLNSAKVWEFDQNHQRWLPVAELALHGDKGDQVFTVAWAPNIGRPYEVMAVATHKGIAIWHLGLNPDIDGRLSVERVALLSGHDGEVWQMEWDMSGMTLATTGGDGMVRLWQSNLNGVWHEQAALEPTS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0136 307 Pfam WD domain, G-beta repeat 258 289 IPR001680 GO:0005515
Vvi2g0136 307 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 258 290 - -
Vvi2g0136 307 ProSiteProfiles Trp-Asp (WD) repeats profile. 258 290 IPR001680 GO:0005515
Vvi2g0136 307 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 37 305 IPR037363 GO:0005198
Vvi2g0136 307 SMART WD40_4 194 239 IPR001680 GO:0005515
Vvi2g0136 307 SMART WD40_4 251 290 IPR001680 GO:0005515
Vvi2g0136 307 SMART WD40_4 78 119 IPR001680 GO:0005515
Vvi2g0136 307 SMART WD40_4 30 68 IPR001680 GO:0005515
Vvi2g0136 307 Gene3D - 19 304 IPR015943 GO:0005515
Vvi2g0136 307 SUPERFAMILY WD40 repeat-like 37 296 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0136 K14299 - vvi:100263869 570.081