Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0133 ATGGGATCAATAGCGGAGCCTCTCCACGTGGATCCATTTCCAGAGCAGAATAGAGAAGAAGATGCAGGAGCAGTTTTCGTGCTGGAGTCAAAAGGAACTTGGTGGCACGCCGGCTTCCACCTGACGACGGCGATCGTCGGACCTACGATACTGACGCTACCGTACGCTTTCAGAGGACTAGGGTGGGGCCTAGGGTTCCTCTGCTTAACAACGATGGGTCTGGTCACGTTCTACTCTTACTATCTCATGTCCAAAGTTCTCGACCACTGCGAAAAGGCCGGTCGGCGCCACATCAGATTCCGGGAGCTCGCCGCCGACGTTTTAGGGTCTGGATGGATGTTTTATTTTGTAATAGTCATCCAAGCCGCCATCAACACAGGAGTGGGAATAGGAGCTATTTTGCTTGGAGGAGAGTGCCTTCAGATCATGTATTCGGACCTTTTTCCCAATGGATCCTTGAAATTGTATGAGTTCATAGCTATGGTGACGGCAGTAATGATCATCCTCTCTCAGCTTCCAACCTTCCACTCCCTCAGGCACATCAACCTTGTTTCGCTTTTTCTCAGCTTAGGCTATACTTTCCTTGTGGTTGGTGCTTGCATTCATGCAGGTACCTCGAAACATCCTCCTCCAAGAGACTATTCCTTAGAGACTTCAGAGTCAGCGAGGGTTTTCAGCGCCTTCACTTCCATCTCCATTATAGCTGCCATTTTTGGGAATGGGATTCTACCTGAGATACAAGCAACTCTTGCACCACCTGCTACTGGGAAGATGGTGAAAGGCCTTTTGATGTGCTACGCTGTAATCTTCGTTACTTTCTACTCAGCTTCAGTGGCTGGATACTGGGCATTCGGAAATAAATCAAGTTCTAACATTCTCAAGAGCCTAATGCCTGATGAGGGACCTTCTTTAGCTCCAACATGGGTTCTAGGCCTGGCAGTTATCTTTGTTCTGCTTCAGCTATTGGCCATTGGGCTGGTCTATTCTCAAGTGGCTTATGAGATCATGGAAAAGAAATCGGCAGATGTGAATCAAGGGCTGTTCTCTAAAAGAAACCTCATCCCCAGGATAATTCTTCGAACACTTTACATGATTTTCTGTGGATTTATGGCAGCAATGCTACCATTTTTCGGAGACATCAATGGCGTTGTTGGAGCAATTGGCTTCATCCCTTTAGATTTCATCCTCCCAATGCTTCTCTACAACATGACTCACAAGCCCCCAAGATCGTCCTTGATGTATTGGATAAACATCTCCATCATCATTGTGTTCACGGATGCAGGAATCATGGGCGCATTCTCTTCCATAAGGAAGTTGATTCTTGATGCCTACAAGTTTAAGCTCTTTAGCAGCGATGTAGTTGATTGA 1368 0.4686 MGSIAEPLHVDPFPEQNREEDAGAVFVLESKGTWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTTMGLVTFYSYYLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIVIQAAINTGVGIGAILLGGECLQIMYSDLFPNGSLKLYEFIAMVTAVMIILSQLPTFHSLRHINLVSLFLSLGYTFLVVGACIHAGTSKHPPPRDYSLETSESARVFSAFTSISIIAAIFGNGILPEIQATLAPPATGKMVKGLLMCYAVIFVTFYSASVAGYWAFGNKSSSNILKSLMPDEGPSLAPTWVLGLAVIFVLLQLLAIGLVYSQVAYEIMEKKSADVNQGLFSKRNLIPRIILRTLYMIFCGFMAAMLPFFGDINGVVGAIGFIPLDFILPMLLYNMTHKPPRSSLMYWINISIIIVFTDAGIMGAFSSIRKLILDAYKFKLFSSDVVD* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0133 455 PANTHER OS05G0424000 PROTEIN-RELATED 34 423 - -
Vvi2g0133 455 Pfam Transmembrane amino acid transporter protein 31 440 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0133 Vvi-Chr2 1193896 1198553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0133 4 455 Organic Solute Cotransporters AT5G41800 80.752 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0133 - - vvi:100248471 899.812