Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0126 ATGAGGAAGCATCAATGGAGAGAATCCATAAAGTCTTTTTTTGGAAATCACATCGATCCTGTAAAGGATGAACAACTGAAGGGAAATAAAACAGAGATTGACGATAAAGTGAAAACGTTATTGGAGCTTATAAAAGAGGAAGGTTTAGATGAAAAGGATGGGAACGGAGATGGAAACTTGAAAAGACAACCACTTATTGAACTAATTGAGGATTTCCATAGAAATTATCAATCTCTCTATGACCGATATGATAATCTCACTGAGATACTAAGGAAAAAAATTCATGGCAAACCGGAGAAAGATACTTCATCTACCACTAGCTCAGACTCAGACTCAGATCATTCAACAAAGGAAAGGAGTGATAAAAATGGAAAAGCTTTTAGCAAAAACCCAGAAACAGAGGAAATTATCATGCATTGGAAATCTGAAGTTGAAAGGTTGGATGGTGAAAAAACTGAACTTTTGGTTGAGAATGGAAATCTGAAGCAAAAACTGGACAATGCTAGTAATGTAGAAGCTGAACTGAACCAGAGACTGGAAGATTTAAATCGGGAGAGAGAGAATTTAATCATGGAAAAAGAGACTGCTATCAAAAGGATTGAAGTGGGAGAGGAAATTGCTGAAGAATTGAAGTCGACGGGTGATAAGTTGAAAGATGAGAAACTAGTCCTCGAGCAAGAACTGGAAGCTGTGAAAGGAGAAATTTCCAATCTGGAGCAGCTATTGGAATCCACAAGGCAGGAAATGAGCAGTTTAAGTCACACTCATAGAGCTATTGAGGAAGAAAAAGATTCTCTAGCCTTGAAAATTTTGGAGATTTCAAATGAGTTTAAGCAGGCGGAGAATGCAATGCAAGAACTCATGGCTGAGTCAAGTCAGCTAAAGGTGAAACTGGGTGACAAAGAAAGTGAACTTTCAAATCTCATGAAGAAGCATGAGGGTCATGAGAATGAAGCATCAGCTCGAATAAAGGGTTTAGAGGCTCAGGTAACAGGCTTGGAACTGGAGCTGAGTTCCCTAAGCACCCAGAGAGGAGAAATGGAAAAGCTGATTGAGAGTACAGCAACTGAAGCCAAACAGCTGGCGGAGGAAAATTTAGGACTGAAAGCCCAGATTTCACAGCTTGAAACGATATCAAAAGAGAGAGAAGAAGAACTTGCTGGTCTCTTGAAGAAATTTAAGGATGATGAGAATGAGTCATTGTCTAAAATAGCTGATTTGACAGCACAGATCAACAATCTGCAGCTGGAGGTGGATTCTCTACAAGCTCAAAAAGACGAATTGGAAAAACAAGTGGTCCAGAACAGTGAAGAAGCATCAGTTCAAGTCAAAGGCTTAACAGAACAGGTCACTGAACTGAAACTGGAATTGGAATCTTTACACAGCTTGAAAATGGAAATGGAACTCATGCTTGAGAAGAAAACTGAGGAGAATTCAGAATATCTTATTCAGATGGGAAATCTGAAAGAGGAGTTGGTGAGCAAGGCTGCCGACCAACAGAGAATACTGGAAGAGAAAGAGAGTTTAACAGGGAAGGTGAAGGACCTGGAATTGGAGATGGACTCCATCCGGAACCACAGAAGCACACTGGAGGAGCAGCTAAGCAGTAAACACCATGAGTACAATCAGTTGAGAGAGGAAAAGGAGGGCTTGCATGTAAGGAGTTTCGACTTGGAGAAAACAATAACAGAGAGAGGGGACGAGCTCTCTGCTCTGCAGAAGAAGTTTGAGGATACAGAGAATGAAGCATCAGCTCGAATCGTGGCATTAACAGCAGAGGTTAACAGTCTGCAAGTGGAGATGGATTCTTTGCATGCTCAGAAAGGTGAATTGGAAGAACAGCTGAGACGCAATGGCGATGAAGCATCAGATCAGATCAAGGACTTGATGGGCCAGCTCAATGAAACAAAACAGGAATTGGAATCTCTACACAGCCAAAAAACCGAAATGGAATTGCTACTCAAGAAAAGAACTCTAGAAAATTCAGAGTTCCTGATTCAGATCGGAAATCTGAAAGAGGAGCTAGCGAACAAGGCTGTGGATCAGCAGAGAACAATGGAAGAGAAGGAGTGTTTGGTATCGAAGGTGAAGGACCTGGAATTGGAGATGGACTCCATAAGGAACCACAAAAGCGAACTGGATGAGCAGCTACGCAGTAAACACCATGAGTACAATCAGTTGAGAGAGGAAAAGGAGGGCTTGCATGTTAGGAGTTTTGACTTGGAGAAAACAATAACAGAGAGAGGGGACGAGCTCTCTGCTCTGCAGAAGAAGTTTGAGGATACAGAGAATGAAGCATCAGCTCGAATCGTGGCATTAACAGCAGAGGTTAACAGTCTGCGAGTGGAGATGGATTCTTTGCAAGCTCAGAAAGGTGAATTGGAAGAACAGCTGAGACGCAGGGGCGATGAAGCATCAGATCAGATCAAGGACTTGATGGGCCAGGTCAGTGAAACGAAACAGGAATTGGAATCTCTACACAGCCAGAAAACAGAAAAGGAATTGCTACTCGAGAAAAGAACTCAAGAAAATTCAGGGTTCCTGATTCAGATAGGAAATCTGAAAGAGGAGCTAGCGAACAAGACTGTGGATCAGCAGAGAATGCTGGAAGAGAAGGAGAGTTTGGTAGCAAAGGTGAAGGACCTGGAATTGGAGATGGACTCCATCCAGAACCACAAAAGCGAACTCGAGGAGCAGCTAAGCAGTAAACACCATGAGTACAATAAGTTGAGTGAGGAAAAGGAGGGTCTGCATGTTAGGAGTTTTGACTTAGAGAAAACATTAACAGACAGAGGGAATGAGTTATCTGCTCTCCAGAAGAAACTTGAGGATGGGGCGAGTGAAGCAACTGCTCAAATTCTGGCCTTAACAACACAAGTCAACAATCTGCAACAAGACATGGAAACCTTGATTGCACAGAAAAGTGAATTGGAGGATCAAATAGTGAGCAAAAGCAATGAAGCTTCAGCTGAAATCAAGGGCTTAATGGACCGGATCACTGAGATGCAACAGGAATTGGATTCTCTAAGCAGCCAGAAAACCGAAATGGAATCACAGCTCGAGGGAAAAGTTCAAGAAAATTCAGAATACTTTAGTCAAATAGGAAGTCTGAAAGACGAGCTAGTGAGCAAGGCTGCGGATCAGCAGAGAATGCTGGAAGAGATAGAGAGTTTAACAGCACGGTTAAAGCACCTGGAAATGGAGATAGAGTTGATTCGGAAACACGAATGCGAACTTGAAGAGCATATAAGAGCCAAAGACCTGGAGTTCAATCAGTTGAGAGAGGAAAAGGAGGGCTTGCACGTTAGGAGTTTTGACTTGGAGAAAACAATTACAGACAGAGGGGATGAGCTGTCTGCTCTACAACAGGAGCTGCATTCCTTGCAGAATGAGAAAAGCCAATTGGAGTTAGAGATCCAAAGACATAAAGAAGAATCTTCGGAAAGCCTGACGGAATTGGAGAATCAGAGGATGGAGTTAACCAGCAAGGTTGAAGAACATCAGAGAATGCTAAGAGAACAGGAAGATGCATTCAACAAGTTAATGGAGGAGTACAAACAATCTGAAGGTTTGTTTCACGAGTTCAAGAATAACCTGCAAGTCACAGAAAGGAGGTTGGAAGAAATGGAGGAAGAGTCCCGCATTCACCTTGAATCCAAAGCCCACATAATTGCTGATTTTGAAACCATGGTTGAAGACCTGAAAAGAGACCTAGAAGTCAAAGGAGATGAACTCAGTACTTTGGTGGAGGAGGTCCGCAATATCGAAGTTAAGCTCCGCTTATCAAACCAGAAGCTCCGTGTCACAGAACAATTACTATCCGAGAAAGAAGAGAGCTACAGGAGAGCAGAAGAGAGGTTCCAGCAAGAAAACAGGGCACTTGAAGGAAAAGTTGCAGTATTATCAGAAGTAATTACTTCCAACAATGAATCCCATGTCAGGATGATCACAGATATCTCAGAGACAGTAAACAATACCTTAGCTGGACTTGAATCCACAGTTGGGAAATTTGAGGAAGACTCCATAAACTTCAAGAACCGCATCTCTGAAATAGCAGGCGAAGTTCAGGTTGCAAGGAACTGGGTGAAGATGGCCAAAAGTGAGAAAGAACAACTGAAGAGTGAGGCAAGTAACCTAGTGGAACAACTAAAATATAAAAAACGGAAGGAAGAAGGTGAGAAGGAGAGCCTGATAAAAGCTGTGAGCCAACTTGAGAAGAAGGTGGGAGAATTGGAGAAGATGATGAATTTGAAGGACGAAGGTATCTTGGATCTGGGGGAGCAGAAGAGGGAAGCCATAAGGCAGCTATGCATCTGGATCGATTATCACCGTGAACGCTGTGATTACCTAAGGGAAATGCTAGCAAAGATGAATATCAGAAGCCAGAGAACTTAG 4395 0.4253 MRKHQWRESIKSFFGNHIDPVKDEQLKGNKTEIDDKVKTLLELIKEEGLDEKDGNGDGNLKRQPLIELIEDFHRNYQSLYDRYDNLTEILRKKIHGKPEKDTSSTTSSDSDSDHSTKERSDKNGKAFSKNPETEEIIMHWKSEVERLDGEKTELLVENGNLKQKLDNASNVEAELNQRLEDLNRERENLIMEKETAIKRIEVGEEIAEELKSTGDKLKDEKLVLEQELEAVKGEISNLEQLLESTRQEMSSLSHTHRAIEEEKDSLALKILEISNEFKQAENAMQELMAESSQLKVKLGDKESELSNLMKKHEGHENEASARIKGLEAQVTGLELELSSLSTQRGEMEKLIESTATEAKQLAEENLGLKAQISQLETISKEREEELAGLLKKFKDDENESLSKIADLTAQINNLQLEVDSLQAQKDELEKQVVQNSEEASVQVKGLTEQVTELKLELESLHSLKMEMELMLEKKTEENSEYLIQMGNLKEELVSKAADQQRILEEKESLTGKVKDLELEMDSIRNHRSTLEEQLSSKHHEYNQLREEKEGLHVRSFDLEKTITERGDELSALQKKFEDTENEASARIVALTAEVNSLQVEMDSLHAQKGELEEQLRRNGDEASDQIKDLMGQLNETKQELESLHSQKTEMELLLKKRTLENSEFLIQIGNLKEELANKAVDQQRTMEEKECLVSKVKDLELEMDSIRNHKSELDEQLRSKHHEYNQLREEKEGLHVRSFDLEKTITERGDELSALQKKFEDTENEASARIVALTAEVNSLRVEMDSLQAQKGELEEQLRRRGDEASDQIKDLMGQVSETKQELESLHSQKTEKELLLEKRTQENSGFLIQIGNLKEELANKTVDQQRMLEEKESLVAKVKDLELEMDSIQNHKSELEEQLSSKHHEYNKLSEEKEGLHVRSFDLEKTLTDRGNELSALQKKLEDGASEATAQILALTTQVNNLQQDMETLIAQKSELEDQIVSKSNEASAEIKGLMDRITEMQQELDSLSSQKTEMESQLEGKVQENSEYFSQIGSLKDELVSKAADQQRMLEEIESLTARLKHLEMEIELIRKHECELEEHIRAKDLEFNQLREEKEGLHVRSFDLEKTITDRGDELSALQQELHSLQNEKSQLELEIQRHKEESSESLTELENQRMELTSKVEEHQRMLREQEDAFNKLMEEYKQSEGLFHEFKNNLQVTERRLEEMEEESRIHLESKAHIIADFETMVEDLKRDLEVKGDELSTLVEEVRNIEVKLRLSNQKLRVTEQLLSEKEESYRRAEERFQQENRALEGKVAVLSEVITSNNESHVRMITDISETVNNTLAGLESTVGKFEEDSINFKNRISEIAGEVQVARNWVKMAKSEKEQLKSEASNLVEQLKYKKRKEEGEKESLIKAVSQLEKKVGELEKMMNLKDEGILDLGEQKREAIRQLCIWIDYHRERCDYLREMLAKMNIRSQRT* 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0126 1464 Coils Coil 1038 1075 - -
Vvi2g0126 1464 Coils Coil 1231 1251 - -
Vvi2g0126 1464 Pfam KIP1-like protein 14 84 IPR011684 GO:0003779
Vvi2g0126 1464 Coils Coil 207 378 - -
Vvi2g0126 1464 Gene3D - 692 848 - -
Vvi2g0126 1464 Gene3D - 994 1168 - -
Vvi2g0126 1464 Gene3D - 172 333 - -
Vvi2g0126 1464 Coils Coil 745 765 - -
Vvi2g0126 1464 PANTHER COP1-INTERACTIVE PROTEIN 1 959 1464 - -
Vvi2g0126 1464 MobiDBLite consensus disorder prediction 96 134 - -
Vvi2g0126 1464 Coils Coil 397 463 - -
Vvi2g0126 1464 Coils Coil 865 913 - -
Vvi2g0126 1464 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Vvi2g0126 1464 Coils Coil 1362 1414 - -
Vvi2g0126 1464 Coils Coil 672 730 - -
Vvi2g0126 1464 Coils Coil 144 199 - -
Vvi2g0126 1464 Coils Coil 770 829 - -
Vvi2g0126 1464 Coils Coil 562 653 - -
Vvi2g0126 1464 Coils Coil 1266 1293 - -
Vvi2g0126 1464 Coils Coil 471 547 - -
Vvi2g0126 1464 Coils Coil 946 1026 - -
Vvi2g0126 1464 Coils Coil 1111 1219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0126 Vvi-Chr2 1131734 1137285 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0126 - K20283 vvi:100255355 2640.91