Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0125 ATGGCAGAAGTAGAGCATAAAGTGACAAAAATCTTGAAGATCATCAAGAACGTAGACCAAGATGGAGGTGGTGGGAGCCGTGAGGGAGACTCTGGGTTGGAACTAGTTGAACTCGTTGAAGATTTGCATGGACAATACCAGACTCTATATGCCCTTTATGATAATCTCAAAAAAGAGCTAAGGAAAAAGGTTCATGGAAGAAAGGAAAAGGACAGTTCTTCGTCTTCCTCCAGCTCAGATTCAGAGTCATTTTATTCATCAAAGGAAGTAGACAGTAACAATGGCAACTTGGAAAATGAGCTCCAGAAGCAGACCGGCCACATCAAGCAAGAACCTGAAGCTGGAAATTCAGAGGGCACTACAATGGAGGAAAATAAAGCTTTGAGCTCGGAAGCTAAAGCAGGGGATACAGAAGGGGAAGTTTCAACTCTGACTGAGTCGAATAGAGCTCAGGCATACGAAGCATCAGCTCGGATAGAGGAGTTGGAGAGCCAGGTGAGTAGCTTGCAGCTTGAGCTGGAATCCGTTTTGGCCCAGGAGAGATCACTGGAAGAACGGGTTGAGCGTACAGCAGCTGAAGCAAAAGAACAATTCGAGGAAATTTTAGGACTAAGAGCCCGGATTTCAGAACTGGAAATGACATCAAAAGAAAAAGGAGATGATGAAATTGAGGGCGGAGAGAATGATGCTTACGCTCAGATTATGGCCTTGACAGCAGAGATAAATACTCTGCAAGTAGAGTTGAATTCTTTGCAGACCTCGAAGACCCAGCTAGAGAATCAGAACAATGAGTTACAAACCATGATTGCAGAACAACAGAGAACACTGCAAGAACAGGATGACACGATCAACGAGATGAATCAGCAGTGTAAACAAGTCAAAGGGCTGCGCAGACAAACCGAGATGAATCTCCAAGCCACAGAAAGGAAAGTTGAGGAAATTGCAGGACAGTTCCGCAAGAATATGGAAGACAGTCTCCGCCTGTTGGCCCAGAGGATCCGGGTTGCCGAGAGACTTCACTATGAGAACAGAGACTTCTATCGGACGACGCGGGAGGCGTTAAAGCAAGAACAAAAAGAGCTCGAAGAAAATATTGCAGCTCACAAAGCAGAATTCAGGAAGCTGAAGCGTATCATAACGATAACAAACGACACGCTGAGTGGATTCGACTTGGTGGCTGAGAGGTTAAGCGAGAGCAGTGGGATCTTCCTGAGCCGTATTTCCAAAATTTCTGAGGAACTTTCATCTGCGAGGAAGTGGATCAAAGGGACAAACAATGAGCTAAAAGAACTGAAGGGTGAGAAATTGAATCTGATCAAGGCCGTGACCCAACTGGAGAAGAGAGTGGGAGAATTGGAGAAGATGGTGAAAGAGAAAGACGAGAGGGTGTTGGGTCTGGGAGAGGAGAAAAGGGAGGCCATAAGGCAACTCTGTATTTGGATTGATTATCACCGCACTGATCTCCATTCTCTCAAAATCCTTGCAAAGATGAGCTCCAGAAGACCAAAAACTACTTGA 1518 0.4539 MAEVEHKVTKILKIIKNVDQDGGGGSREGDSGLELVELVEDLHGQYQTLYALYDNLKKELRKKVHGRKEKDSSSSSSSSDSESFYSSKEVDSNNGNLENELQKQTGHIKQEPEAGNSEGTTMEENKALSSEAKAGDTEGEVSTLTESNRAQAYEASARIEELESQVSSLQLELESVLAQERSLEERVERTAAEAKEQFEEILGLRARISELEMTSKEKGDDEIEGGENDAYAQIMALTAEINTLQVELNSLQTSKTQLENQNNELQTMIAEQQRTLQEQDDTINEMNQQCKQVKGLRRQTEMNLQATERKVEEIAGQFRKNMEDSLRLLAQRIRVAERLHYENRDFYRTTREALKQEQKELEENIAAHKAEFRKLKRIITITNDTLSGFDLVAERLSESSGIFLSRISKISEELSSARKWIKGTNNELKELKGEKLNLIKAVTQLEKRVGELEKMVKEKDERVLGLGEEKREAIRQLCIWIDYHRTDLHSLKILAKMSSRRPKTT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0125 505 Coils Coil 421 462 - -
Vvi2g0125 505 Coils Coil 234 317 - -
Vvi2g0125 505 Coils Coil 39 59 - -
Vvi2g0125 505 Coils Coil 344 378 - -
Vvi2g0125 505 Coils Coil 152 200 - -
Vvi2g0125 505 PANTHER COP1-INTERACTIVE PROTEIN 1 130 221 - -
Vvi2g0125 505 Coils Coil 319 339 - -
Vvi2g0125 505 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 60 IPR011684 GO:0003779
Vvi2g0125 505 MobiDBLite consensus disorder prediction 64 147 - -
Vvi2g0125 505 MobiDBLite consensus disorder prediction 76 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0125 Vvi-Chr2 1124940 1126457 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0125 - K20283 vvi:100255355 894.419