Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0124 ATGGCTACAAAAGACTCCGACCCTTCATTAGGGTTTCTGACGAAGAAAGAAACGGAGGTGAAGCTGCCGCGGCCGACTAGGGTTAAGAACAAGACCCCAGCCCCCATCCAAATCACCGCCGAGCAAATCCTCCGAGAAGCTCGTGAACGGCAAGAGGCTGAAATCCGACCGCCGAAGCAGAAGATCACTGATTCGACTGAGCTCGCTGACTATCGCCTCCGCAAACGGAAGGAGTTCGAAGACCTAATCCGAAGAGTGCGATGGAACATCAGCGTCTGGATCAAGTACGCGCAGTGGGAGGAGTCTCAGAAGGACTTCAACCGAGCGCGATCTGTGTGGGAGCGAGCGCTCGAGGTCGATTACAGGAACCACACGTTGTGGCTGAAGTACGCCGAGGTGGAGATGAAGAACAAGTTCATCAACCACGCGCGGAATGTTTGGGACCGCGCTGTCACTCTATTGCCTCGCGTCGATCAGCTCTGGTACAAGTACATTCACATGGAGGAGATGCTGGGGAATGTGGCTGGTGCGCGGCAGATTTTCGAGAGATGGATGACTTGGATGCCGGACCAGCAGGGTTGGTTATCATACATTAAGTTTGAGATTCGATACAACGAGATGGAGAGAGCGCGGGGAATTTTTGAGCGGTTCGTGCAGTGTCACCCGAAGGTCGGGGCATGGATTCGCTATGCCAAATTTGAGATGAAGAATGGAGAGGTTGCGAGGGCAAGGAATTGTTACGAGAGGGCCATTGAGAAGTTGGCCGATGATGAGGATGCTGAACAATTGTTCCTTGCATTTGCGGAATTTGAAGAGCGGTGTAAGGAATCCGAGCGTGCTAGGTGCATTTACAAGTTCGCTCTTGACCACATACCAAAAGGTAGGGCGGAGGACTTGTACAGAAAGTTTGTGGCATTTGAAAAGCAATATGGTGACAAGGAGGGAATAGAGGATGCAATCGTGGGGAAGAGGAGGTTTCAGTATGAAGAGGAGGTTAGGAAGAATCCACTCAATTACGACTCATGGTTTGATTATATTAGATTGGAGGAGAATACAGGGAACAAAGCCAGGACTAGAGAAGTTTATGAGCGGGCTATCGCTAATGTTCCTCCTGCTGAGGAGAAGCGATACTGGCAGCGCTACATTTACTTGTGGATTAATTATGCTTTATACGAAGAGCTTGAGGCAGAAGATGCGGAGCGGACACGAGATGTATATAGGGAGTGTCTTAAGCTGATTCCTCACGACAAATTCTCATTTGCTAAAATATGGCTTATGGCTGGCCAGTTTGAAATACGACAATTAAATCTCAAGGGTGCCCGTCAAATCCTGGGGAATGCAATTGGAAAGGCTCCAAAAGATAAGATTTTCAAGAAATACATTGAGATCGAGTTGCAACTCGGCAATATAGATCGTTGTCGGAAGTTATATGAGAAATATTTGGAGTGGTCCCCTGAGAACTGCTATGCTTGGAGCAAGTATGCTGAATTGGAGAAGTCTTTGTCTGAAACAGAGCGAGCTAGAGCTATCTTTGAGCTTGCAATTGCTCAACCTGCATTGGATATGCCAGAGTTATTGTGGAAGGCATATATTGACTTTGAGATATCAGAGGGAGAATTCGAAAGGACCAGGGAGCTCTATGAGAGGCTTCTAGATCGAACAAAGCACTTGAAAGTGTGGATTAGTTATGCAAAATTCGAGGCATCTGCTATGGTGGAGGATGACATGGGTTCAGACTTACCAGAAGATGATGCCCAGGAATCTATTCTAGAAGAAAAAAGGCAATGCATTGAACGAGCTAGAAGGGTTTTTGAGAAAGCCGTTAACTATTTTAGAACATCTGCACCTGAACTGAAAGAGGAAAGGACCATGCTTCTGGAAGAGTGGTTGAACATGGAAAGTAGCTTTGGTGAGCTTGGTGATGTCAGTTTGGTCCAGATAAAGTTGCCCAAGAAACTCAAGAAGAAGAGGCAAATAGTAACGGAGGATGGTCCATCTGGTTACGAGGAGTATATAGACTACCTGTTCCCTGAGGAAACCCAGACCACAAATCTCAAGATTTTGGAAGCAGCATACAGGTGGAAGAAGCAAAAAACTTCTGATGACGAATAG 2112 0.4702 MATKDSDPSLGFLTKKETEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWNISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMTWMPDQQGWLSYIKFEIRYNEMERARGIFERFVQCHPKVGAWIRYAKFEMKNGEVARARNCYERAIEKLADDEDAEQLFLAFAEFEERCKESERARCIYKFALDHIPKGRAEDLYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEEEVRKNPLNYDSWFDYIRLEENTGNKARTREVYERAIANVPPAEEKRYWQRYIYLWINYALYEELEAEDAERTRDVYRECLKLIPHDKFSFAKIWLMAGQFEIRQLNLKGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKYLEWSPENCYAWSKYAELEKSLSETERARAIFELAIAQPALDMPELLWKAYIDFEISEGEFERTRELYERLLDRTKHLKVWISYAKFEASAMVEDDMGSDLPEDDAQESILEEKRQCIERARRVFEKAVNYFRTSAPELKEERTMLLEEWLNMESSFGELGDVSLVQIKLPKKLKKKRQIVTEDGPSGYEEYIDYLFPEETQTTNLKILEAAYRWKKQKTSDDE* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0124 703 SUPERFAMILY TPR-like 80 203 IPR011990 GO:0005515
Vvi2g0124 703 FunFam Cell cycle control protein 120 324 - -
Vvi2g0124 703 PANTHER PRE-MRNA SPLICING FACTOR 23 699 IPR045075 GO:0000398
Vvi2g0124 703 SMART hat_new_1 238 273 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 353 387 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 319 351 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 435 466 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 275 309 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 205 236 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 104 136 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 595 635 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 172 203 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 70 102 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 397 433 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 468 500 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 502 536 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 538 569 IPR003107 GO:0006396
Vvi2g0124 703 SMART hat_new_1 138 170 IPR003107 GO:0006396
Vvi2g0124 703 SUPERFAMILY TPR-like 194 257 IPR011990 GO:0005515
Vvi2g0124 703 SUPERFAMILY TPR-like 265 565 IPR011990 GO:0005515
Vvi2g0124 703 FunFam Crooked neck pre-mRNA-splicing factor 1 328 480 - -
Vvi2g0124 703 Pfam HAT (Half-A-TPR) repeat 206 234 IPR003107 GO:0006396
Vvi2g0124 703 MobiDBLite consensus disorder prediction 1 34 - -
Vvi2g0124 703 Gene3D Tetratricopeptide repeat domain 322 520 IPR011990 GO:0005515
Vvi2g0124 703 Gene3D Tetratricopeptide repeat domain 121 321 IPR011990 GO:0005515
Vvi2g0124 703 Gene3D Tetratricopeptide repeat domain 521 580 IPR011990 GO:0005515
Vvi2g0124 703 MobiDBLite consensus disorder prediction 10 26 - -
Vvi2g0124 703 FunFam Cell cycle control protein cwf4 481 686 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0124 K12869 - vvi:100255371 1393.64