Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi2g0110 ATGTATAGCCGGGGATCGAATCACCGGCTAGCTGGTTCGGCTTTCCGATCTCAAGTTTCGGTTCTCATGCTCACCATGTTTGCCTCTATGGCATCGATTTACGTTGCCGGCCGGCTATGGCTGGACTCTGAGAATAGGGTTTATTTGATTAAAGAGCTTGATAGGAGAACTGGTCAGGCGAAATCAGCCATATCAGTTGATGACACACTGAAAATTATAGCATGCAGGGAACAACAGAAGAAGTTAACGGCCCTTGAGATGGAGCTAGCAGCAGCACAGCAGGAAGGTTTTGTCTCAAATCACTTGTCAGAAAATAAGGGGACTCCTAAGAAAAAGCTTTTAGCTGTTGTAGGAATTATTACAAAGTTTGGCCGCAAGAACAATAGAGATGCAATCCGTAGGGCATGGATGCCAACTGGTACAGATTTAAAAAGACTGGAGGCCCAAAAAGGCATTGTTATACGATTTGTGATAGGAAGAAGTGCAAATCGTGGAGACAGTTCAGACAAGGATATTGACAGTGAAAATATGCAGACTAATGACTTCATTATTCTTAATAACCATGTGGAGGCACCTGAGGAGCATCCAAAAAAGACAAAATTGTTCTTTATTCATGCTGCAGAGAACTGGAATGCTGAGTTCTATGCAAAGGTCAATGACGATGTTTATGTTAATATTGATACTCTAGGAGCAACTCTTGCAACTCATTTGGATAAGCCTCGAGTTTATATTGGGTGTATGAAATCAGGCGAAGTTTTCTCTGAGTCGACCCACAAGTGGTATGAACCAGACTGGTGGAAATTTGGTGATGGAAAGTCGTACTTCCGGCATGCATCAGGTGAGATTTATGTAATTTCGCAAGCTTTGGCTCAGTTTATCTCAATAAATAGATCTATCCTCCTCTCGTATGCCCATGATGATGTTACCACGGGATCATGGTTTATTGGACTTGATGTAAAGTATATTGATGATACAAAATTTTGCTGCTCATCCTGGGCATCAGGAGCGATATGTGCTGGTGTATGA 1026 0.422 MYSRGSNHRLAGSAFRSQVSVLMLTMFASMASIYVAGRLWLDSENRVYLIKELDRRTGQAKSAISVDDTLKIIACREQQKKLTALEMELAAAQQEGFVSNHLSENKGTPKKKLLAVVGIITKFGRKNNRDAIRRAWMPTGTDLKRLEAQKGIVIRFVIGRSANRGDSSDKDIDSENMQTNDFIILNNHVEAPEEHPKKTKLFFIHAAENWNAEFYAKVNDDVYVNIDTLGATLATHLDKPRVYIGCMKSGEVFSESTHKWYEPDWWKFGDGKSYFRHASGEIYVISQALAQFISINRSILLSYAHDDVTTGSWFIGLDVKYIDDTKFCCSSWASGAICAGV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi2g0110 341 Coils Coil 75 95 - -
Vvi2g0110 341 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 79 320 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi2g0110 341 Pfam Galactosyltransferase 128 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vvi2g0110 341 Gene3D - 115 331 - -
Vvi2g0110 341 FunFam Hexosyltransferase 104 333 - -
Vvi2g0110 341 Pfam Domain of unknown function (DUF4094) 17 94 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi2g0110 Vvi-Chr2 978588 986669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi2g0110 22 341 Glycosyltransferase AT5G53340 69.159 4.73e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi2g0110 K20854 - vvi:100251974 677.937